Parental gene: | PAFAH1B1, ENSMODG00000010776 |
| Aliases: | None |
| Description: | platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) [Source:HGNC Symbol;Acc:8574] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 2:518133084..518168510(+) |
>ENSMODG00000010776
ATGGTGCTGTCACAGAGACAACGAGATGAACTAAATCGAGCTATAGCAGATTATCTTCGTTCAAATGGCTATGAAGAGGC
ATATTCGGTTTTTAAAAAAGAAGCTGAATTAGATATGAATGAAGAGTTAGATAAGAAATATGCTGGTCTTTTGGAAAAAA
AATGGACATCAGTTATCAGATTACAAAAGAAGGTTATGGAATTAGAATCAAAGCTAAATGAAGCAAAGGAAGAATTTACA
TCAGGTGGGCCTCTTGGTCAGAAACGAGACCCAAAAGAATGGATTCCTCGACCTCCAGAAAAGTATGCATTGAGTGGACA
TAGGAGTCCGGTCACTCGTGTCATTTTCCACCCAGTTTTCAGTGTTATGGTCTCTGCTTCTGAGGATGCTACAATAAAGG
TGTGGGATTATGAAACTGGAGATTTTGAACGAACTCTTAAGGGACACACAGACTCTGTACAAGATATTTCCTTTGACCAC
AGTGGCAAGCTTTTGGCTTCTTGTTCTGCTGATATGACCATTAAACTTTGGGATTTCCAGGGTTTCGAGTGTATCAGAAC
CATGCATGGCCATGATCACAATGTCTCTTCAGTAGCCATCATGCCTAATGGAGATCACATAGTATCTGCCTCAAGGGACA
AAACTATAAAAATGTGGGAAGTGCAAACTGGCTACTGTGTGAAGACTTTCACAGGACACAGAGAATGGGTGCGCATGGTG
CGGCCAAATCAGGATGGCACCTTAATTGCCAGTTGTTCTAATGACCAGACAGTTCGTGTATGGGTAGTAGCCACAAAGGA
ATGCAAAGCTGAGCTCCGAGAACATGAGCATGTGGTTGAGTGCATTTCCTGGGCCCCAGAAAGCTCTTATTCCTCTATCT
CTGAAGCTACAGGATCTGAGACTAAAAAAAGTAGCAAACCTGGGCCTATCTTGCTGTCTGGATCCAGAGACAAGACCATT
AAGATGTGGGACGTTATCACTGGCATGTGCCTTATGACCCTTGTGGGCCATGATAATTGGGTACGTGGAGTTCTCTTCCA
TTCTGGGGGAAAGTTTATTTTGAGTTGTGCTGATGACAAGACCCTACGTGTGTGGGACTATAAGAACAAGCGATGCATGA
AGACCCTCAACGCGCATGAACACTTTGTTACCTCCTTGGATTTCCACAAGACGGCACCATACGTGGTTACTGGAAGTGTA
GATCAAACAGTAAAAGTGTGGGAGTGCCGTTGA
ATGGTGCTGTCACAGAGACAACGAGATGAACTAAATCGAGCTATAGCAGATTATCTTCGTTCAAATGGCTATGAAGAGGC
ATATTCGGTTTTTAAAAAAGAAGCTGAATTAGATATGAATGAAGAGTTAGATAAGAAATATGCTGGTCTTTTGGAAAAAA
AATGGACATCAGTTATCAGATTACAAAAGAAGGTTATGGAATTAGAATCAAAGCTAAATGAAGCAAAGGAAGAATTTACA
TCAGGTGGGCCTCTTGGTCAGAAACGAGACCCAAAAGAATGGATTCCTCGACCTCCAGAAAAGTATGCATTGAGTGGACA
TAGGAGTCCGGTCACTCGTGTCATTTTCCACCCAGTTTTCAGTGTTATGGTCTCTGCTTCTGAGGATGCTACAATAAAGG
TGTGGGATTATGAAACTGGAGATTTTGAACGAACTCTTAAGGGACACACAGACTCTGTACAAGATATTTCCTTTGACCAC
AGTGGCAAGCTTTTGGCTTCTTGTTCTGCTGATATGACCATTAAACTTTGGGATTTCCAGGGTTTCGAGTGTATCAGAAC
CATGCATGGCCATGATCACAATGTCTCTTCAGTAGCCATCATGCCTAATGGAGATCACATAGTATCTGCCTCAAGGGACA
AAACTATAAAAATGTGGGAAGTGCAAACTGGCTACTGTGTGAAGACTTTCACAGGACACAGAGAATGGGTGCGCATGGTG
CGGCCAAATCAGGATGGCACCTTAATTGCCAGTTGTTCTAATGACCAGACAGTTCGTGTATGGGTAGTAGCCACAAAGGA
ATGCAAAGCTGAGCTCCGAGAACATGAGCATGTGGTTGAGTGCATTTCCTGGGCCCCAGAAAGCTCTTATTCCTCTATCT
CTGAAGCTACAGGATCTGAGACTAAAAAAAGTAGCAAACCTGGGCCTATCTTGCTGTCTGGATCCAGAGACAAGACCATT
AAGATGTGGGACGTTATCACTGGCATGTGCCTTATGACCCTTGTGGGCCATGATAATTGGGTACGTGGAGTTCTCTTCCA
TTCTGGGGGAAAGTTTATTTTGAGTTGTGCTGATGACAAGACCCTACGTGTGTGGGACTATAAGAACAAGCGATGCATGA
AGACCCTCAACGCGCATGAACACTTTGTTACCTCCTTGGATTTCCACAAGACGGCACCATACGTGGTTACTGGAAGTGTA
GATCAAACAGTAAAAGTGTGGGAGTGCCGTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000007168 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000003439 | within_species_paralog | 1 retrogene | |
| Mus musculus | ENSMUSG00000020745 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000007796 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000008551 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000002826 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_441 | 63.22 | 62.44 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_460 | 76.61 | 53.17 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000010776 retrocopies