Parental gene: | SRSF5, ENSMODG00000011362 |
| Aliases: | None |
| Description: | serine/arginine-rich splicing factor 5 [Source:HGNC Symbol;Acc:10787] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 1:275452520..275456281(+) |
>ENSMODG00000011362
ATGAGTGGCTGTAGAGTATTCATTGGAAGGCTAAATCCGGCAGCCCGAGAAAAAGATGTCGAAAGATTTTTTAAAGGATA
TGGACGAATAAGAGACATTGATCTGAAAAGAGGCTTTGGGTTTGTGGAATTTGAGGACCCGAGGGATGCTGATGATGCTG
TTTATGAACTTGATGGGAAGGAACTCTGCAGTGAAAGGGTTACAATTGAACATGCCAGGGCTCGTTCTCGAGGTGGGCGA
GGAAGAGGGCGATACTCTGATCGTTTTAGTAGCCGCCGTCCACGAAACGATAGGAGAAATGCCCCACCTGTACGAACAGA
AAATCGTCTTATAGTTGAGAATTTATCTTCCCGAGTCAGCTGGCAGGATCTCAAAGATTTCATGAGGCAAGCTGGGGAAG
TAACCTTTGCAGATGCTCATAGGCCTAAACTAAATGAAGGGGTGGTTGAGTTTGCCTCTTACAGTGACTTAAAGAATGCT
ATTGAAAAACTATCTGGAAAAGAAATAAATGGAAGGAAAATTAAACTGATTGAAGGCAGCAAAAGGCACAGTAGGTCGAG
AAGCCGATCACGGTCCCGCACTAGGAGCTCTTCTAGGTCACGGAGCCGGTCTCGTTCCCGAAGCCGCAAATCTTACAGCA
GGTCAAGAAGCCGAAGCCATAGCAAATCCAGATCTGTTAGTAGGTCACCTATGCCTGAGAAGAGCCAGAAACGAGGCTCT
TCAAGTAGATCTAAATCTCCAGCATCTGTGGATCGCCAGAGGTCCAGATCTAGATCTAGGTCTGTTGACAGTGGCAATTG
A
ATGAGTGGCTGTAGAGTATTCATTGGAAGGCTAAATCCGGCAGCCCGAGAAAAAGATGTCGAAAGATTTTTTAAAGGATA
TGGACGAATAAGAGACATTGATCTGAAAAGAGGCTTTGGGTTTGTGGAATTTGAGGACCCGAGGGATGCTGATGATGCTG
TTTATGAACTTGATGGGAAGGAACTCTGCAGTGAAAGGGTTACAATTGAACATGCCAGGGCTCGTTCTCGAGGTGGGCGA
GGAAGAGGGCGATACTCTGATCGTTTTAGTAGCCGCCGTCCACGAAACGATAGGAGAAATGCCCCACCTGTACGAACAGA
AAATCGTCTTATAGTTGAGAATTTATCTTCCCGAGTCAGCTGGCAGGATCTCAAAGATTTCATGAGGCAAGCTGGGGAAG
TAACCTTTGCAGATGCTCATAGGCCTAAACTAAATGAAGGGGTGGTTGAGTTTGCCTCTTACAGTGACTTAAAGAATGCT
ATTGAAAAACTATCTGGAAAAGAAATAAATGGAAGGAAAATTAAACTGATTGAAGGCAGCAAAAGGCACAGTAGGTCGAG
AAGCCGATCACGGTCCCGCACTAGGAGCTCTTCTAGGTCACGGAGCCGGTCTCGTTCCCGAAGCCGCAAATCTTACAGCA
GGTCAAGAAGCCGAAGCCATAGCAAATCCAGATCTGTTAGTAGGTCACCTATGCCTGAGAAGAGCCAGAAACGAGGCTCT
TCAAGTAGATCTAAATCTCCAGCATCTGTGGATCGCCAGAGGTCCAGATCTAGATCTAGGTCTGTTGACAGTGGCAATTG
A
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 662 .97 RPM |
| SRP007412_cerebellum | 788 .06 RPM |
| SRP007412_heart | 369 .40 RPM |
| SRP007412_kidney | 611 .01 RPM |
| SRP007412_liver | 443 .57 RPM |
| SRP007412_testis | 555 .91 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macropus eugenii | ENSMEUG00000001521 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000003107 | within_species_paralog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000008669 | other_paralog | 1 retrogene | |
| Mus musculus | ENSMUSG00000021134 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000005513 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000001972 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_934 | 62.94 | 62.78 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000011362 retrocopies