Parental gene: | ASF1B, ENSMODG00000012099 |
| Aliases: | None |
| Description: | anti-silencing function 1B histone chaperone [Source:HGNC Symbol;Acc:20996] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 3:446196288..446203942(+) |
>ENSMODG00000012099
ATGGCCAAAGTTTCTGTTCTGAACGTGTCGGTGCTGGAGAACCCGAGCCCTTTCCACAGCCCCTTCCAGTTCGAGATCAG
CTTCGAGTGCAGCGAGGCCTTGGCCGACGACCTAGAATGGAAAATAATTTATGTGGGTTCAGCAGAGAGTGAGGAGTTTG
ACCAGATACTAGACTCAGTGCTAGTAGGACCAGTCCCAGCAGGGAGACACATGTTTGTCTTTCAGGCAGATGCCCCTAAC
GCCTCCCTAATCCCAGAAACTGATGCAGTGGGTGTAACTGTGGTCCTCATAACCTGCACCTACCATGGGCAGGAGTTCAT
CCGAGTTGGCTACTATGTCAACAATGAATATACCAACCCTGAGCTTCGGGAGAACCCACCCCTGAAACCAGACTTCTCTC
AGCTCCAGCGAAACATCTTGGCTTCTAATCCCCGGGTGACTCGATTCCATATCAACTGGGACAGTACCACAGATAAATTG
GAGGACATTGAAAACCAAGATCCTGTCTTAAGCCTGGGGCTCCCTTTGAGTTGTCCCCCAACCAAAGGGCTAGATCTTCC
AGACTGTGCCCCCAGCATCATTCCTGAAAATTCCATGGACTGCATCTAA
ATGGCCAAAGTTTCTGTTCTGAACGTGTCGGTGCTGGAGAACCCGAGCCCTTTCCACAGCCCCTTCCAGTTCGAGATCAG
CTTCGAGTGCAGCGAGGCCTTGGCCGACGACCTAGAATGGAAAATAATTTATGTGGGTTCAGCAGAGAGTGAGGAGTTTG
ACCAGATACTAGACTCAGTGCTAGTAGGACCAGTCCCAGCAGGGAGACACATGTTTGTCTTTCAGGCAGATGCCCCTAAC
GCCTCCCTAATCCCAGAAACTGATGCAGTGGGTGTAACTGTGGTCCTCATAACCTGCACCTACCATGGGCAGGAGTTCAT
CCGAGTTGGCTACTATGTCAACAATGAATATACCAACCCTGAGCTTCGGGAGAACCCACCCCTGAAACCAGACTTCTCTC
AGCTCCAGCGAAACATCTTGGCTTCTAATCCCCGGGTGACTCGATTCCATATCAACTGGGACAGTACCACAGATAAATTG
GAGGACATTGAAAACCAAGATCCTGTCTTAAGCCTGGGGCTCCCTTTGAGTTGTCCCCCAACCAAAGGGCTAGATCTTCC
AGACTGTGCCCCCAGCATCATTCCTGAAAATTCCATGGACTGCATCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000004085 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000016482 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000013713 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000000537 | ortholog_one2one | 4 retrogenes | |
| Sorex araneus | ENSSARG00000000534 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_366 | 79.90 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_367 | 81.77 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mdom_369 | 81.77 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mdom_688 | 84.48 | 85.15 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000012099 retrocopies