Parental gene: | DNMT3A, ENSMODG00000015850 |
| Aliases: | None |
| Description: | DNA (cytosine-5-)-methyltransferase 3 alpha [Source:HGNC Symbol;Acc:2978] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 1:505710441..505778779(-) |
>ENSMODG00000015850
GTGGAAAACAGCGACACCCCTAAGGAAGTTGCCCCAACTTCAAAGGCCCCCTCCATGGCTCAGGACACCGGTCCTTCGGA
GCTGCTGCCCAATGGGGATGTGGAGAAGCCCAGTGAGCCCCAGCCAGAGGAAGGGAGCCCGGCGGGGCGAAAAGGTGGCG
CTCGGGCGGAGGGAGAGGCGGAGGCAGAGAGTGCGCCTGAGGCTGCCCGCACCCTGGAGAATGGCTGCTGTACCCCCAAG
GATGGGCAGGAAGCCCCTGTGGTGGGGGGCAAAGAAGAGAAGGAAGAGACCAACTTTGATTCTGTGAAAATGGAGGCAAC
AGGCGCTCGGGGCCGGTTACGGGGAGGCCTGGGCTGGGAGTCCAGCCTTCGACAGCGGCCCATGCAGCGGCTCACCTTCC
AGGCCGGCGATCCCTACTATATCAGCAAACGCAAGCGAGATGAGTGGCTGGCCCGGTGGAAAAGGGAGGCTGAGAAGAAA
GCCAAGGTCATTGCAGTGATGAATGTCGTAGAAGAAAACCAGGGGCCTGGGGAGCCACAAAAAGTGGAGGAGGCCAGTCC
TCCTACTTTGCAACAACCTACTGATCCTGCTTCCCCCACTGTGGCCACCACACCTGAGCCAGTGGGGGCTGATGCTGGGG
ACAAGAATACTGCCAAGGCCTCTGATGATGAGCCTGAATATGAGGATGGCCGAGGCTTTGGTATTGGGGAGTTGGTATGG
GGAAAACTTCGAGGCTTCTCCTGGTGGCCTGGCCGAATTGTATCCTGGTGGATGACAGGCAGAAGCCGAGCAGCTGAAGG
CACTCGATGGGTCATGTGGTTTGGAGATGGCAAGTTCTCAGTGGTTTGTGTTGAGAAATTGATGCCACTGAGCTCCTTCT
GCAGCGCCTTCCACCAAGCCACATATAACAAGCAGCCTATGTACCGCAAAGCCATCTATGAGGTCCTTCAGGTGGCCAGC
AGCCGCGCTGGGAAGCTGTTTCCGGCCTGCCCGGAGAATGATGAAAGTGACACAGCCAAGGCAGTGGAGGTGCAGAACAA
GCAAATGATCGAATGGGCTCTGGGTGGCTTCCAGCCCTCTGGCCCCAAGGGCCTGGAGCCACCAGAAGAAGAGAGAAATC
CCTACAAAGAAGTTTACACTGATATGTGGGCCCCAGTAGAGCCTGAAGCTGCTGCCTATGCCCCACCTCCACCAGCCAAA
AAACCCCGAAAGAGCACAGCAGAGAAGCCCAAGATCAAAGAGATCATTGATGAACGCACAAGAGAGCGGCTGGTATATGA
GGTGCGGCAGAAGTGCAGGAATATCGAAGACATCTGCATCTCCTGTGGGAGTCTCAACGTCACCCTGGAACACCCCCTCT
TCATCGGAGGAATGTGCCAAAACTGCAAGAACTGCTTCCTGGAGTGTGCCTATCAGTACGACGATGACGGCTACCAGTCA
TATTGTACTATCTGCTGTGGGGGTCGAGAGGTCCTCATGTGTGGGAACAACAACTGTTGCAGGTGCTTCTGTGTGGAATG
TGTGGACCTGTTGGTGGGACCAGGTGCTGCCCAGGCAGCCATCAAGGAAGACCCCTGGAACTGCTACATGTGTGGGCACA
AAGGCACCTATGGGCTGCTGCGGCGGCGAGATGACTGGCCGTCGCGCCTCCAGATGTTTTTCGCCAATAACCATGACCAA
GAGTTTGACCCTCCTAAAGTTTATCCCCCAGTCCCAGCTGAAAAACGGAAGCCAATCCGGGTGCTATCTCTTTTCGATGG
AATTGCCACAGGACTATTGGTGCTGAAGGACCTGGGGATCCAGGTAGACCGCTACATTGCCTCAGAGGTGTGTGAGGACT
CCATCACTGTGGGCATGGTGCGGCACCAAGGGAAGATCATGTACGTGGGGGACGTCCGCAATGTCACCCAGAAGCACATA
CAGGAATGGGGCCCTTTTGATTTGGTGATTGGAGGCAGTCCCTGCAATGATCTTTCTATTGTCAACCCTGCTCGGAAGGG
TCTTTATGAGGGCACTGGACGGCTCTTCTTTGAGTTCTACCGCCTTCTGCATGAGGCCCGGCCCAAGGAGGGCGATGACC
GCCCCTTCTTCTGGCTCTTTGAAAACGTGGTGGCCATGGGGGTCAGTGATAAGCGGGACATCTCACGCTTTCTAGAGTCC
AACCCTGTGATGATTGATGCCAAAGAAGTGTCAGCAGCGCACAGGGCTCGCTACTTCTGGGGTAACCTTCCCGGTATGAA
CAGGCCATTGGCATCTACCGTGAATGACAAGCTGGAGCTTCAGGAATGTTTGGAGCATGGCAGGATAGCCAAGTTCAGCA
AAGTGAGGACCATTACGACTAGGTCAAACTCCATCAAGCAGGGCAAAGACCAGCATTTTCCCGTCTTCATGAATGAGAAA
GAGGACATCTTGTGGTGCACTGAAATGGAAAGGGTCTTTGGCTTCCCAGTCCATTACACGGATGTCTCCAACATGAGCCG
TTTGGCAAGGCAAAGACTGCTGGGCCGGTCGTGGAGTGTGCCTGTGATTCGCCACCTCTTTGCCCCCTTGAAGGAATATT
TTGCCTGTGTGTAA
GTGGAAAACAGCGACACCCCTAAGGAAGTTGCCCCAACTTCAAAGGCCCCCTCCATGGCTCAGGACACCGGTCCTTCGGA
GCTGCTGCCCAATGGGGATGTGGAGAAGCCCAGTGAGCCCCAGCCAGAGGAAGGGAGCCCGGCGGGGCGAAAAGGTGGCG
CTCGGGCGGAGGGAGAGGCGGAGGCAGAGAGTGCGCCTGAGGCTGCCCGCACCCTGGAGAATGGCTGCTGTACCCCCAAG
GATGGGCAGGAAGCCCCTGTGGTGGGGGGCAAAGAAGAGAAGGAAGAGACCAACTTTGATTCTGTGAAAATGGAGGCAAC
AGGCGCTCGGGGCCGGTTACGGGGAGGCCTGGGCTGGGAGTCCAGCCTTCGACAGCGGCCCATGCAGCGGCTCACCTTCC
AGGCCGGCGATCCCTACTATATCAGCAAACGCAAGCGAGATGAGTGGCTGGCCCGGTGGAAAAGGGAGGCTGAGAAGAAA
GCCAAGGTCATTGCAGTGATGAATGTCGTAGAAGAAAACCAGGGGCCTGGGGAGCCACAAAAAGTGGAGGAGGCCAGTCC
TCCTACTTTGCAACAACCTACTGATCCTGCTTCCCCCACTGTGGCCACCACACCTGAGCCAGTGGGGGCTGATGCTGGGG
ACAAGAATACTGCCAAGGCCTCTGATGATGAGCCTGAATATGAGGATGGCCGAGGCTTTGGTATTGGGGAGTTGGTATGG
GGAAAACTTCGAGGCTTCTCCTGGTGGCCTGGCCGAATTGTATCCTGGTGGATGACAGGCAGAAGCCGAGCAGCTGAAGG
CACTCGATGGGTCATGTGGTTTGGAGATGGCAAGTTCTCAGTGGTTTGTGTTGAGAAATTGATGCCACTGAGCTCCTTCT
GCAGCGCCTTCCACCAAGCCACATATAACAAGCAGCCTATGTACCGCAAAGCCATCTATGAGGTCCTTCAGGTGGCCAGC
AGCCGCGCTGGGAAGCTGTTTCCGGCCTGCCCGGAGAATGATGAAAGTGACACAGCCAAGGCAGTGGAGGTGCAGAACAA
GCAAATGATCGAATGGGCTCTGGGTGGCTTCCAGCCCTCTGGCCCCAAGGGCCTGGAGCCACCAGAAGAAGAGAGAAATC
CCTACAAAGAAGTTTACACTGATATGTGGGCCCCAGTAGAGCCTGAAGCTGCTGCCTATGCCCCACCTCCACCAGCCAAA
AAACCCCGAAAGAGCACAGCAGAGAAGCCCAAGATCAAAGAGATCATTGATGAACGCACAAGAGAGCGGCTGGTATATGA
GGTGCGGCAGAAGTGCAGGAATATCGAAGACATCTGCATCTCCTGTGGGAGTCTCAACGTCACCCTGGAACACCCCCTCT
TCATCGGAGGAATGTGCCAAAACTGCAAGAACTGCTTCCTGGAGTGTGCCTATCAGTACGACGATGACGGCTACCAGTCA
TATTGTACTATCTGCTGTGGGGGTCGAGAGGTCCTCATGTGTGGGAACAACAACTGTTGCAGGTGCTTCTGTGTGGAATG
TGTGGACCTGTTGGTGGGACCAGGTGCTGCCCAGGCAGCCATCAAGGAAGACCCCTGGAACTGCTACATGTGTGGGCACA
AAGGCACCTATGGGCTGCTGCGGCGGCGAGATGACTGGCCGTCGCGCCTCCAGATGTTTTTCGCCAATAACCATGACCAA
GAGTTTGACCCTCCTAAAGTTTATCCCCCAGTCCCAGCTGAAAAACGGAAGCCAATCCGGGTGCTATCTCTTTTCGATGG
AATTGCCACAGGACTATTGGTGCTGAAGGACCTGGGGATCCAGGTAGACCGCTACATTGCCTCAGAGGTGTGTGAGGACT
CCATCACTGTGGGCATGGTGCGGCACCAAGGGAAGATCATGTACGTGGGGGACGTCCGCAATGTCACCCAGAAGCACATA
CAGGAATGGGGCCCTTTTGATTTGGTGATTGGAGGCAGTCCCTGCAATGATCTTTCTATTGTCAACCCTGCTCGGAAGGG
TCTTTATGAGGGCACTGGACGGCTCTTCTTTGAGTTCTACCGCCTTCTGCATGAGGCCCGGCCCAAGGAGGGCGATGACC
GCCCCTTCTTCTGGCTCTTTGAAAACGTGGTGGCCATGGGGGTCAGTGATAAGCGGGACATCTCACGCTTTCTAGAGTCC
AACCCTGTGATGATTGATGCCAAAGAAGTGTCAGCAGCGCACAGGGCTCGCTACTTCTGGGGTAACCTTCCCGGTATGAA
CAGGCCATTGGCATCTACCGTGAATGACAAGCTGGAGCTTCAGGAATGTTTGGAGCATGGCAGGATAGCCAAGTTCAGCA
AAGTGAGGACCATTACGACTAGGTCAAACTCCATCAAGCAGGGCAAAGACCAGCATTTTCCCGTCTTCATGAATGAGAAA
GAGGACATCTTGTGGTGCACTGAAATGGAAAGGGTCTTTGGCTTCCCAGTCCATTACACGGATGTCTCCAACATGAGCCG
TTTGGCAAGGCAAAGACTGCTGGGCCGGTCGTGGAGTGTGCCTGTGATTCGCCACCTCTTTGCCCCCTTGAAGGAATATT
TTGCCTGTGTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 69 .61 RPM |
| SRP007412_cerebellum | 145 .93 RPM |
| SRP007412_heart | 48 .24 RPM |
| SRP007412_kidney | 68 .48 RPM |
| SRP007412_liver | 50 .85 RPM |
| SRP007412_testis | 40 .27 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000008172 | ortholog_one2many | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000004108 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000024688 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_859 | 94.68 | 85.53 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000015850 retrocopies