Parental gene:

Taf7l, ENSMUSG00000009596

Aliases:Taf7l, 4933438I11Rik, 50kDa, Taf2q
Description:TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:MGI Symbol;Acc:MGI:1921719]
Organism:Mouse (Mus musculus)
Coordinates:X:134460117..134476490(-)


>ENSMUSG00000009596
ATGGAGCGCGGCGAGGAAGCACCCACTGAGGGAGCTCCGCCTGAGGGGGCTTTGGTGGAGGCCAAAGCCCCCGTTATTCC
TGAAGCCCCCGCTACAGATGTTTCGACAACCGAAGAAGCGGGCTCCAAAGAGCCCCAGGTCCCTTCCGGCCCTCGTCCCG
AAGGTGCTGGGGACACTTGTGACACCCGAGGGGCTCGAGGCCCACCGACTCCCGGCAGGGCCAAGTCTCAGAAGACCCCC
CGCCAGGGCACTGCTCGCTGCCAGACCCTCGAGAGTGCCATGCGATCCATGAGTGTAAGGCTTGAATGTCATGACGTTGA
GGAACAGTTTATATTGCGTCTGCCTCCGGAACAAGCTTATGCTGTCAGGAAAATTATACATTCTAGAAATGCTGCTTGGA
AGGATAAACTAAAAATTGACTTTTCTCCTGATGGCCACCATGCGGTTGTTCAAGTAGACAACGTCTCACTGCCTGCTAAA
CTGGTTAATCTGCCTTGTGTTATCGGAAGCCTGAAAACTATTGACAGAAAGACATTTTATAAGACCGCGGATGTTTCTCA
GATGCTTGTATGCAGTCCTGAAGGTGAGCCTCATTCTCCTCCTGAAGAACCAGTTGTCTCTACTGGTCCTACTGTAATTG
GAATTAGTGAAGGGAAGGCAGAGAGAAAAAAATATAACTGGAAGCATGGCATTACTCCACCACTTAAGAATGTCAGAAAG
AAAAGGTTCCGGAAAACAACAAAAAAGCTCCCAGATGTGAAACAAGTGGATGAAATCAACTTTAGTGAGTACACTCAATC
TCCAAGTGTGGAAAAAGAAGTGAAGAGACTGCTCTACTCAGATGCTGAAGCTGTCAGTGTCCGCTGGGAAGTCGTTGATG
ATGATGATGCTAAGGAAATAGAAAGTCAAGGGTCCATGCCAACCACTCCAGGAATCTCACAGATGGGTGGTGCTAGTTTA
TCAGACTATGATGTGTTTCGGGAGATGATGGGTGATTCTGGCAGCAACAGTAATGATGTGGAAGAGAAGAGTAATGAAGG
TGACGACGATGATGATGAAGATGAAGATGATGAAGACTATGGAAATGAAAAGGAGGAGGAAGAGACAGACAATTCTGAAG
AGGAGTTAGAGAAGGAGCTGCAGGCCAAATTTAATGAATTTAGCCTCCATGAAGCAGACCAAGATTACAGTTCAATAACC
ATGGCAATTCAGAAACTGATTTTTATCAAAGAAAAGAGGCTCCAGATGATTTATAAAAAAGCCCAGCGACAGAAGGAACT
CCTCAGGAAAGTGGAAAACTTGACCCTCAAGAGACATTTCCAGAATGTTTTGGGGAAGCTTAACATAATGGAAAAAGAGA
AGTGTGAACAGATTTATCACCTCCAGGAACAACTGAAATGTTTCCTGAAGGAGTAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .28 RPM
SRP007412_cerebellum 0 .04 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .02 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 27 .08 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009247 ortholog_one2many 1 retrogene
retro_amel_6,
Bos taurus ENSBTAG00000001979 ortholog_one2many 1 retrogene
retro_btau_107,
Loxodonta africana ENSLAFG00000006941 ortholog_one2many 1 retrogene
retro_lafr_209,
Oryctolagus cuniculus ENSOCUG00000004497 ortholog_one2many 1 retrogene
retro_ocun_191,
Rattus norvegicus ENSRNOG00000026315 ortholog_one2one 1 retrogene
retro_rnor_134,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_72 60.22 78.13
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Download FASTA sequences of all ENSMUSG00000009596 retrocopies