Parental gene:

Lamtor1, ENSMUSG00000030842

Aliases:Lamtor1, 2400001E08Rik, Pdro, p18
Description:late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 [Source:MGI Symbol;Acc:MGI:1913758]
Organism:Mouse (Mus musculus)
Coordinates:7:101905836..101911901(+)


>ENSMUSG00000030842
ATGGGGTGCTGCTATAGCAGCGAAAACGAGGACTCGGACCAGGATCGGGAGGAGAGGAAGCTGCTGCTGGACCCCAGTAG
CACCCCTACCAAAGCCCTCAATGGAGCCGAGCCCAACTACCATAGCCTACCTTCAGCTCGCACAGATGAGCAGGCCCTGC
TTTCCTCCATCCTTGCCAAGACAGCTAGCAACATCATTGATGTGTCTGCCGCAGACTCCCAGGGCATGGAACAGCATGAG
TACATGGACCGGGCAAGGCAGTACAGTACCCGCTTGGCTGTGCTTAGCAGCAGTCTGACCCATTGGAAGAAGCTGCCACC
GTTGCCATCTCTCACCAGCCAGCCCCACCAAGTGCTGGCCAGTGAGCCTATCCCCTTCTCTGACTTGCAGCAGGTCTCCA
GGATAGCTGCGTATGCCTATAGTGCACTTTCTCAGATCCGCGTGGATGCGAAAGAAGAGCTGGTTGTACAGTTTGGGATC
CCATGA

Library Parental gene expression (RPM)
SRP007412_brain 36 .33 RPM
SRP007412_cerebellum 31 .26 RPM
SRP007412_heart 60 .11 RPM
SRP007412_kidney 48 .80 RPM
SRP007412_liver 30 .34 RPM
SRP007412_testis 19 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010854 possible_ortholog 2 retrogenes
retro_amel_1176, retro_amel_436,
Macropus eugenii ENSMEUG00000003560 ortholog_one2many 1 retrogene
retro_meug_17,
Rattus norvegicus ENSRNOG00000020016 ortholog_one2one 1 retrogene
retro_rnor_2788,
Tarsius syrichta ENSTSYG00000014730 possible_ortholog 2 retrogenes
retro_tsyr_1324, retro_tsyr_33,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1805 96.89 100.00
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2. retro_mmus_2538 95.03 100.00
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Download FASTA sequences of all ENSMUSG00000030842 retrocopies