Parental gene: | CASC4, ENSNLEG00000005533 |
| Aliases: | None |
| Description: | cancer susceptibility candidate 4 [Source:HGNC Symbol;Acc:24892] |
| Organism: | Gibbon (Nomascus leucogenys) |
| Coordinates: | GL397306.1:5206046..5330241(+) |
>ENSNLEG00000005533
ATGGTGGGTTTCGGGGCCAACCGGCGGGCTGGCCGCCTGCCCTCTCTCGTGCTCGTGGTGCTGCTGGTGGTGATTGTCGT
CCTCGCCTTCAACTACTGGAGCATCTCCTCCCGCCACGTCCTGCTTCAGGAGGAGGTGGCCGAGCTGCAGGGCCAGGTCC
AGCGCACCGAAGTGGCCCGCGGGCGGCTGGAAAAGCGCAATTCGGACCTCTTGCTGTTGGTGGACACGCACAAGAAACAG
ATCGACCAGAAGGAGGCCGACTACGGCCGCCTCAGCAGCCGGCTGCAGGCCAGAGAGGGCCTCGGGAAGAGATGCGAGGA
TGACAAGGTTAAACTACAGAACAACATATCGTACCAGATGGCAGACATACATCATTTAAAGGAGCAACTTGCCGAGCTTC
GTCAGGAGTTTCTTCGACAAGAAGACCAGCTTCAGGACTATAGGAAGAACAATACTTACCTTGTGAAGAGGTTAGAATAT
GAAAGTTTTCAGTGTGGACAGCAGATCAAGGAATTGAGAGCACAGCATGAAGAAAATATTAAAAAGTTAGCAGACCAGTT
TTTACAGGAACAAAAGCAAGAGGCCCACAAGATTCAATCAAATGATGGAAAAGAATTGGATATAAATGATCAAGTAGTAC
CTAAAAATATTCCAAAAATTGCTGAGAATGTTGCAGATAAGAATGAAGAACCCTCAAGCAATCATATTCCACATGGGAAA
GAACAAATCAAAAGAGGTGGTGATGCAGGGATGCCTGGAATAGAAGAGAATGACCTAGCAAAAGTTGATGATCTTCCCCC
TGCTTTAAGGAAGCCTCCTATTTCAGTTTCTCAACATGAAAGTCATCAAGCAATCTCCCATCTTCCAACTGGACAACCTC
TCTCCCCAAATATGCCTCCAGATTCACACGTAAACCACCATGGAAACCCCGGTACTTCAAAACAGAATCCTTCCAGTCCT
CTTCAGCGTTTAATTCCAGGCTCAAACTTGGACAGTGAACCCAGAATTCAAACAGATATACTAAAGCAGGCTACCAAGGA
TAGAGTCAGTGATTTCCATAAATTGAAGCAAAGCCGATTCTTTGATGAAAATGAATCCCCTGTTGATCCGCAGCATGGCT
CTAAACTGGCGGATTATAATGGGGATGATGGTAACGTAGGTGAGTATGAGGCAGACAAGCAGGCTGAGCTGGCTTACAAT
GAGGAAGAAGATGGTGATGGTGGAGAGGAAGACGTCCAAGATGATGAAGAACGAGAGCTTCAAATGGATCCTGCAGACTA
TGGAAAGCAACATTTCAATGATGTCCTTTAA
ATGGTGGGTTTCGGGGCCAACCGGCGGGCTGGCCGCCTGCCCTCTCTCGTGCTCGTGGTGCTGCTGGTGGTGATTGTCGT
CCTCGCCTTCAACTACTGGAGCATCTCCTCCCGCCACGTCCTGCTTCAGGAGGAGGTGGCCGAGCTGCAGGGCCAGGTCC
AGCGCACCGAAGTGGCCCGCGGGCGGCTGGAAAAGCGCAATTCGGACCTCTTGCTGTTGGTGGACACGCACAAGAAACAG
ATCGACCAGAAGGAGGCCGACTACGGCCGCCTCAGCAGCCGGCTGCAGGCCAGAGAGGGCCTCGGGAAGAGATGCGAGGA
TGACAAGGTTAAACTACAGAACAACATATCGTACCAGATGGCAGACATACATCATTTAAAGGAGCAACTTGCCGAGCTTC
GTCAGGAGTTTCTTCGACAAGAAGACCAGCTTCAGGACTATAGGAAGAACAATACTTACCTTGTGAAGAGGTTAGAATAT
GAAAGTTTTCAGTGTGGACAGCAGATCAAGGAATTGAGAGCACAGCATGAAGAAAATATTAAAAAGTTAGCAGACCAGTT
TTTACAGGAACAAAAGCAAGAGGCCCACAAGATTCAATCAAATGATGGAAAAGAATTGGATATAAATGATCAAGTAGTAC
CTAAAAATATTCCAAAAATTGCTGAGAATGTTGCAGATAAGAATGAAGAACCCTCAAGCAATCATATTCCACATGGGAAA
GAACAAATCAAAAGAGGTGGTGATGCAGGGATGCCTGGAATAGAAGAGAATGACCTAGCAAAAGTTGATGATCTTCCCCC
TGCTTTAAGGAAGCCTCCTATTTCAGTTTCTCAACATGAAAGTCATCAAGCAATCTCCCATCTTCCAACTGGACAACCTC
TCTCCCCAAATATGCCTCCAGATTCACACGTAAACCACCATGGAAACCCCGGTACTTCAAAACAGAATCCTTCCAGTCCT
CTTCAGCGTTTAATTCCAGGCTCAAACTTGGACAGTGAACCCAGAATTCAAACAGATATACTAAAGCAGGCTACCAAGGA
TAGAGTCAGTGATTTCCATAAATTGAAGCAAAGCCGATTCTTTGATGAAAATGAATCCCCTGTTGATCCGCAGCATGGCT
CTAAACTGGCGGATTATAATGGGGATGATGGTAACGTAGGTGAGTATGAGGCAGACAAGCAGGCTGAGCTGGCTTACAAT
GAGGAAGAAGATGGTGATGGTGGAGAGGAAGACGTCCAAGATGATGAAGAACGAGAGCTTCAAATGGATCCTGCAGACTA
TGGAAAGCAACATTTCAATGATGTCCTTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000006998 | ortholog_one2one | 4 retrogenes | |
| Homo sapiens | ENSG00000166734 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000005362 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000006428 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000007010 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_nleu_2857 | 88.81 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSNLEG00000005533 retrocopies