Parental gene:

ACTR3C, ENSOCUG00000000459

Aliases:None
Description:ARP3 actin-related protein 3 homolog C (yeast) [Source:HGNC Symbol;Acc:37282]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:13:14087589..14209985(+)


>ENSOCUG00000000459
ATGGCGGGCTCCCTGCCTCCCTGCGTGGTGGACTGTGGCACCGGGTATACCAAGCTTGGCTACGCAGGCAACACTGAGCC
ACAGTTCATTATTCCTTCATGTATTGCCATCAGGGAGTCAGCAAAGGTAGTCGACCAAGCCCAAAGGAGAGTGTTGAGGG
GAGTTGATGACCTTGATTTTTTCATAGGGGATGAAGCCATTGATAAACCTACATATGCTACCAAGTGGCCTATACGACAT
GGAATCATTGAAGACTGGGATCTTATGGAAAGGTTCATGGAACAGGTAGTTTTTAAGTATCTTCGAGCTGAACCGGAAGA
CCATTATTTTTTAATGACAGAACCTCCGCTGAACACCCCAGAAAATAGAGAATATCTTGCAGAAATTATGTTTGAGTCAT
TTAATGTCCCAGGACTCTACATTGCAGTTCAGGCAGTGCTGGCCTTAGCAGCGTCCTGGACATCTCGACAAGTTGGCGAG
CGCACGTTGACAGGGATAGTCATTGACAGCGGGGACGGCGTCACCCATGTGATCCCAGTGGCAGAAGGTTATGTAATTGG
AAGCTGCATCAAACACATCCCGATTGCAGGTAGAGATATTACATATTTCATTCAACAGCTGCTAAGGGAGAGGGAGGTGG
GAATCCCTCCTGAGCAGTCACTGGAGACCGCAAAAGCCATTAAGGAGAAGTACTGTTACATTTGCCCGGATATTGTAAAG
GAATTTGCTAAGTATGACATGGATCCCCGGAAGTGGATCAAACAATACACGGGTATCAATGCAATCAATCAGAAGAAGTT
CATTATAGATGTTGGTTACGAAAGGTTCCTGGGACCTGAGATATTCTTTCACCCAGAGTTTGCCAACCCAGACTTCATGG
AGTCCATCTCGGATGTTGTCGATGAAGTAATACAAAACTGTCCCATTGATGTGCGACGCCCGCTGTATAAGAATGTCGTT
CTTTCAGGAGGCTCCACAATGTTCAGGGATTTTGGACGTCGATTGCAGAGAGATTTAAAAAGAGTGGTGGACGCCAGGTT
AAAACTAAGTGAAGAGCTGAGTGGCGGCAGAATCAAGCCTAAGCCTGTGGAGGTTCAGGTGATAACACATCATATGCAGC
GCTATGCCGTGTGGTTTGGAGGCTCAATGCTGGCTTCCACCCCGGAGTTTTTTCAGGTCTGCCATGCCAAGAAGGACTAT
GAAGAGTACGGCCCTGGCATCTGCCGTCACAACCCTGTCTTCGGAGTCATGTCTTAG

Library Parental gene expression (RPM)
SRP017611_liver 8 .09 RPM
SRP017611_kidney 16 .22 RPM
SRP017611_brain 85 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000007730 ortholog_one2many 5 retrogenes
retro_chof_1134, retro_chof_1204, retro_chof_1899, retro_chof_208, retro_chof_2171,
Dasypus novemcinctus ENSDNOG00000019288 ortholog_one2one 2 retrogenes
retro_dnov_1143, retro_dnov_2539,
Homo sapiens ENSG00000133627 possible_ortholog 7 retrogenes
retro_hsap_1676, retro_hsap_2126, retro_hsap_2540, retro_hsap_2966, retro_hsap_4334, retro_hsap_4921, retro_hsap_561,
Macropus eugenii ENSMEUG00000004885 ortholog_one2one 5 retrogenes
retro_meug_1340, retro_meug_1477, retro_meug_2105, retro_meug_330, retro_meug_899,
Otolemur garnettii ENSOGAG00000003249 ortholog_one2one 2 retrogenes
retro_ogar_1307, retro_ogar_3388,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_320 72.14 66.03
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Download FASTA sequences of all ENSOCUG00000000459 retrocopies