Parental gene: | COIL, ENSOCUG00000011345 |
| Aliases: | None |
| Description: | coilin [Source:HGNC Symbol;Acc:2184] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 19:31106867..31124675(+) |
>ENSOCUG00000011345
ATGGCAGCTTCCGACACGGTTAGGTTACGGCTTCAATTTGATTATCCACCGCCAGCCACTCCACACTGTACAGCCTTCTG
GCTTCTGGTCGACTTGAACCGATGCCGAGTCGTCACGGATCTCATCAGTCTCATCCGCCAGCGCTTCGGCTTCAGTTCGG
GGGCCCTCCTGGGCCTCTACTTGGAGGGGGGGCTCCTGCCCCCAGCCGAGAGCGCGCGCCTGGTGCGGGACAACGACTGC
CTCAGAGTTAAATTAGAAGAGAGAGGAGTTGCTGAGAATTCTGTAGTAGTCAGGAATGGTGATAGTACTCATTTTTTACC
TAGAAAAGCAAAGAAGCGGGCATTTAAGTTGGAGGAGAACGAAGAAAGTGACATAGATTGCAAGTATTCAAAGAAGCATT
GGAAAAGGCAAGAAAACAGTAGTAATAATGAGAAGGCCTTGGTTCCGCACACAAAAGCAGTCACAGAGCAGGCTGTGGGG
AAAAAAAACAAGAGAAAGAACAAAGCGGCATGTGGCACGATGGATGACAATGATGAAGAAACCCAAAGGAAATCACCAAA
GAAAAAAGAGAAATGCGAATATAAAAAGCAGACCAAGAATTCCAAGTCTCCCAAAGTGCCCGTGGTAAAAGAGTGGACCG
CCCAGAACTGTAGTACTCCAAAAAGTCCTGCTAAGAACAGCCTGGCGAAAGCCAGAAGGAAAGCTGGTGTAGGCACTGTT
TCAAAAGACAGCCCCAGTTCCTCCTCGGAGTCGGAGTCTTGTCACGAATCCACCAGTGATGGGCTCAGCAATGTCACTTC
GGAGGCCAGAAATTCCTCAGAGAAAATTCCCACTGAGTTAGCAAAGGAAGGATCCTCTACAAAAAATACGACTGCAAACA
AACTGCCTGCAAAAGGTGGCTTTAGCCTTACTCCGAGCCAGGGCAAGACCACCAGAACATCCTCGTCTAGTTCAGACTCG
AGTTCAGAGTCGGATGACCAGTGCCTGCTGTCTAAGAGCACTCCCGAGAGTGCCTCGGGGCTCTTCAAGACGGCTGGCCT
CTTTCCAGGGAGAGGCTGCCCGGGTCCAGGGCTGTCCTCACAGGTGCCACCTGCTGCCAGCTGGAAGTATTCTGACTTAA
GCGGTGGCAGACAGGCTCCCGGTCCTCCCTCTGTTGCGACTCTCCCCTCCAGTCTAGGAAGAGGATGGGGTCGAGGAGAG
GACCTTCTTTCTTGGAAGGGAGCCAGAGGTCGGGGCGCGTGGGGGAGAGGGCGAGGGCGAGGGCAGGCTGTGTCTGGTGT
TGTAAACAGAAATGCTGACTATCAGAAGCAGAAGCAATTAAATGAAATGATAACAAACGCATCTACTTTTATCCAGAATC
CAGTAGAGACACACAAGAAGGATTATAGTCTGTTACCACTCTTAGCAGCTGCCCCTCAGGTTGGAGAAAAGATTGCATTT
AAGCTTTTGGAACTAACATCCAATTACTCTCCCGATGTCTCTGACTACAAGGAAGGAAAAATACTAAGCCACAATCCAGA
GACCCAGCAAGTAGATATAGAAATTCTTTCATCCTTACCTGCCTTGAAAGAACCTGGGAAATTTGATTTGGTTTATCACA
ACGAAAATGGCACCGAGGTAGTGGAGTATGCCGTGACGCAGGAAAGGAAGATCACCGTTTTTTGGAGAGAGTTGATTGAT
CCAAGGCTGATTATTGAACCTGCAAGTAACACCTTGCGTTCAGAACTTGTC
ATGGCAGCTTCCGACACGGTTAGGTTACGGCTTCAATTTGATTATCCACCGCCAGCCACTCCACACTGTACAGCCTTCTG
GCTTCTGGTCGACTTGAACCGATGCCGAGTCGTCACGGATCTCATCAGTCTCATCCGCCAGCGCTTCGGCTTCAGTTCGG
GGGCCCTCCTGGGCCTCTACTTGGAGGGGGGGCTCCTGCCCCCAGCCGAGAGCGCGCGCCTGGTGCGGGACAACGACTGC
CTCAGAGTTAAATTAGAAGAGAGAGGAGTTGCTGAGAATTCTGTAGTAGTCAGGAATGGTGATAGTACTCATTTTTTACC
TAGAAAAGCAAAGAAGCGGGCATTTAAGTTGGAGGAGAACGAAGAAAGTGACATAGATTGCAAGTATTCAAAGAAGCATT
GGAAAAGGCAAGAAAACAGTAGTAATAATGAGAAGGCCTTGGTTCCGCACACAAAAGCAGTCACAGAGCAGGCTGTGGGG
AAAAAAAACAAGAGAAAGAACAAAGCGGCATGTGGCACGATGGATGACAATGATGAAGAAACCCAAAGGAAATCACCAAA
GAAAAAAGAGAAATGCGAATATAAAAAGCAGACCAAGAATTCCAAGTCTCCCAAAGTGCCCGTGGTAAAAGAGTGGACCG
CCCAGAACTGTAGTACTCCAAAAAGTCCTGCTAAGAACAGCCTGGCGAAAGCCAGAAGGAAAGCTGGTGTAGGCACTGTT
TCAAAAGACAGCCCCAGTTCCTCCTCGGAGTCGGAGTCTTGTCACGAATCCACCAGTGATGGGCTCAGCAATGTCACTTC
GGAGGCCAGAAATTCCTCAGAGAAAATTCCCACTGAGTTAGCAAAGGAAGGATCCTCTACAAAAAATACGACTGCAAACA
AACTGCCTGCAAAAGGTGGCTTTAGCCTTACTCCGAGCCAGGGCAAGACCACCAGAACATCCTCGTCTAGTTCAGACTCG
AGTTCAGAGTCGGATGACCAGTGCCTGCTGTCTAAGAGCACTCCCGAGAGTGCCTCGGGGCTCTTCAAGACGGCTGGCCT
CTTTCCAGGGAGAGGCTGCCCGGGTCCAGGGCTGTCCTCACAGGTGCCACCTGCTGCCAGCTGGAAGTATTCTGACTTAA
GCGGTGGCAGACAGGCTCCCGGTCCTCCCTCTGTTGCGACTCTCCCCTCCAGTCTAGGAAGAGGATGGGGTCGAGGAGAG
GACCTTCTTTCTTGGAAGGGAGCCAGAGGTCGGGGCGCGTGGGGGAGAGGGCGAGGGCGAGGGCAGGCTGTGTCTGGTGT
TGTAAACAGAAATGCTGACTATCAGAAGCAGAAGCAATTAAATGAAATGATAACAAACGCATCTACTTTTATCCAGAATC
CAGTAGAGACACACAAGAAGGATTATAGTCTGTTACCACTCTTAGCAGCTGCCCCTCAGGTTGGAGAAAAGATTGCATTT
AAGCTTTTGGAACTAACATCCAATTACTCTCCCGATGTCTCTGACTACAAGGAAGGAAAAATACTAAGCCACAATCCAGA
GACCCAGCAAGTAGATATAGAAATTCTTTCATCCTTACCTGCCTTGAAAGAACCTGGGAAATTTGATTTGGTTTATCACA
ACGAAAATGGCACCGAGGTAGTGGAGTATGCCGTGACGCAGGAAAGGAAGATCACCGTTTTTTGGAGAGAGTTGATTGAT
CCAAGGCTGATTATTGAACCTGCAAGTAACACCTTGCGTTCAGAACTTGTC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 6 .78 RPM |
| SRP017611_kidney | 14 .70 RPM |
| SRP017611_brain | 17 .05 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000008740 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000013960 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000023961 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000003687 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000008026 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000008248 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000008882 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1798 | 68.00 | 63.60 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000011345 retrocopies