Parental gene:

MTIF3, ENSOCUG00000011721

Aliases:None
Description:mitochondrial translational initiation factor 3 [Source:HGNC Symbol;Acc:29788]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL018735:491987..501761(-)


>ENSOCUG00000011721
ATGCAGACTCGGGCGGTGCAGCATGGTTTTGATTGGGTCCGAATCATCATCAAATGGATATCTCATCAGATCAGTGCATT
GATGGCTGCTGTTCTCAAGCGGTTGATACTGCAAACCGTGAAATCTGAAAATAATTGCATTAGAAGATGCTTTGGTGAAC
ACTTGATGCAAAAGACAGACCCAGCACAGTTGTCCCTGATTGCTTCTGCCCCAAGACCATCCTACCTACCTCACGCAAAA
GCTTTTAGTACTGCTGAAGACACTCAGGCTGAGAGAAAAAAGACAAAAAAGAATGAAACTAGTTTTAGTAACGTTGGAAG
AAAAATTAAGGAGCGAATCATTCACGTCCTTGACGAGAAGGGCAATGATTTGGGAAACATGCACCGAGCCGAAGTCATCA
GGCTCATGGATGAGCGAGACCTGAGGCTGGTACAGAGGGACGCCCACGCTGAGCCCCCCGAGTACCAGCTCATGACGGGC
CTCCAGATCCACAAGGAACGCCTGCGGCTCCGCGAGATGGAAAAGGCTCAGCCCAAAGCTGGACCAATCCTGACAAAAGA
GCTGACTTTCTCTTCAAATATTGGACAACATGATTTGGACACAAAGAATAAACAGATTCAGCAGTGGATTGAGAAAAAAT
ACCAAGTTCAAATTACTATAAAGAAGGGGAAAAATGCAGATGAGCCAGAAAACAAAACGGAGGAGCTATTTAATCAAATA
CTCCAGACAATGCCTGGAATAGCCACCTTCAAATCCAAGCCACAAGCTGTTAAAGGAGGAAAAGCTGTAATGTGTGTTCT
TCGTCATTTGAGCAAAAAGGAAGAGAATACATATAAAGAATCTCAAGGGACCCAGAAAAGAGACACTTTGCACAAAGAAA
GTAGAAGTGAAAAGGAATCAAATGATCCACATCAGTGA

Library Parental gene expression (RPM)
SRP017611_liver 5 .55 RPM
SRP017611_kidney 13 .68 RPM
SRP017611_brain 14 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004404 ortholog_one2one 1 retrogene
retro_chof_466,
Homo sapiens ENSG00000122033 ortholog_one2one 1 retrogene
retro_hsap_3284,
Gorilla gorilla ENSGGOG00000008409 ortholog_one2one 1 retrogene
retro_ggor_1318,
Nomascus leucogenys ENSNLEG00000000343 ortholog_one2one 1 retrogene
retro_nleu_1350,
Pongo abelii ENSPPYG00000005236 ortholog_one2one 1 retrogene
retro_pabe_2713,
Pan troglodytes ENSPTRG00000005732 ortholog_one2one 1 retrogene
retro_ptro_2221,
Tupaia belangeri ENSTBEG00000012276 ortholog_one2one 3 retrogenes
retro_tbel_4048, retro_tbel_4602, retro_tbel_760,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_533 75.18 90.16
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Download FASTA sequences of all ENSOCUG00000011721 retrocopies