Parental gene:

SNX12, ENSOCUG00000014919

Aliases:None
Description:sorting nexin 12 [Source:HGNC Symbol;Acc:14976]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:X:49537123..49544154(-)


>ENSOCUG00000014919
ATGTCGGACACGGCCGTAGCTGACACTCGGCGACTGAACTCGAAGCCGCAGGACCTGACTGATGCTTACGGGCCGCCAAG
TAACTTCCTGGAGATCGACATCTTTAATCCACAGACGGTGGGCGTGGGCCGCGCGCGCTTCACCACCTATGAGGTTCGCA
TGCGGACCAATCTACCTATCTTCAAACTGAAGGAGTCTTGTGTACGGCGGCGCTACAGTGACTTTGAGTGGCTGAAAAAT
GAGCTGGAGCGAGATAGTAAGATTGTAGTACCACCGCTGCCTGGGAAAGCCTTGAAGCGGCAGCTCCCTTTCCGGGGAGA
TGAAGGGATCTTTGAAGAGTCTTTCATTGAAGAAAGGAGGCAGGGCCTCGAACAGTTTATTAATAAAATTGCTGGGCACC
CACTGGCTCAGAATGAACGTTGCCTACACATGTTCCTGCAGGAAGAGGCAATCGACAGGAACTACGTCCCAGGGAAGTTG
GCTGCCCATCCCCTGGCCTGA

Library Parental gene expression (RPM)
SRP017611_liver 7 .40 RPM
SRP017611_kidney 17 .03 RPM
SRP017611_brain 23 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000007871 ortholog_one2one 1 retrogene
retro_btau_1080,
Dasypus novemcinctus ENSDNOG00000018281 ortholog_one2many 1 retrogene
retro_dnov_9,
Oryctolagus cuniculus ENSOCUG00000004744 within_species_paralog 1 retrogene
retro_ocun_918,
Oryctolagus cuniculus ENSOCUG00000005858 within_species_paralog 2 retrogenes
retro_ocun_1022, retro_ocun_750,
Otolemur garnettii ENSOGAG00000008973 ortholog_one2one 1 retrogene
retro_ogar_2565,
Rattus norvegicus ENSRNOG00000004036 ortholog_one2one 2 retrogenes
retro_rnor_1751, retro_rnor_501,
Sorex araneus ENSSARG00000001830 ortholog_one2one 1 retrogene
retro_sara_452,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1286 55.56 69.28
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Download FASTA sequences of all ENSOCUG00000014919 retrocopies