Parental gene: | PCMTD1, ENSOCUG00000016958 |
| Aliases: | None |
| Description: | protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 [Source:HGNC Symbol;Acc:30483] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 3:66589475..66632006(-) |
>ENSOCUG00000016958
ATGGGAGGAGCTGTGAGTGCTGGGGAAGATAATGATGACTTAATTGATAACTTAAAAGAAGCTCAGTATATTCGCACTGA
AAGAGTGGAGCAAGCCTTCAGAGCAATTGATCGTGGAGATTACTATCTGGAAGGCTACAGAGACAATGCTTATAAAGACT
TAGCCTGGAAACATGGAAACATACACTTGTCAGCACCTTGCATTTATTCTGAAGTTATGGAGGCATTGAAACTTCAACCA
GGATTGTCTTTTCTTAACCTGGGAAGTGGAACCGGATATTTAAGTACAATGGTGGGCTTAATTTTAGGTCCTTTTGGAAT
AAATCATGGGATTGAGCTTCATTCAGATGTGGTGGAATATGCCAAGGAAAAACTGGAGAGCTTCATCAAAAATAGTGATA
GCTTTGATAAATTTGAGTTCTGTGAACCTGCATTTGTGGTTGGTAATTGCCTCCAGATAGCATCTGACAGTCATCAGTAT
GATCGAATTTATTGTGGTGCTGGAGTACAGAAAGACCATGAAAACTACATGAAAATTTTACTGAAAGTGGGAGGCATACT
CGTCATGCCTATAGAAGATCAGTTAACACAGATTATGCGAACTGGACAAAACACTTGGGAAAGTAAAAATATCCTTGCTG
TTTCATTTGCTCCACTTGTGCAGCCAAGTAAGAATGATAATGGCAAGCCTGATTCTGTGGGACTCCCCCCCTGTGCTGTC
AGGAACCTGCAGGACTTGGCACGCATTTATATTCGCCGCACACTTAGAAATTTCATCAATGATGAGATGCAGGCCAAGGG
AATTCCCCAAAGGGCTCCACCCAAAAGGAAAAGAAAGAGAGTGAAACAGAGAATTAACACGTATGTCTTTGTGGGTAATC
AGCTTATTCCTCAGCCTCTAGACAGTGAGGAGGATGAGAAAATGGAAGAAGATCACAAGGAAGAGGAGGAGCGAGAGCAC
AGTGAAGCCATGAAGCCAGAAGAACCTCCTCAGAATTTACTGAGAGAGAAAATCATGAAGCTGCCCCTCCCTGAGTCTTT
AAAAGCTTACTTGACGTATTTTAGAGACAAA
ATGGGAGGAGCTGTGAGTGCTGGGGAAGATAATGATGACTTAATTGATAACTTAAAAGAAGCTCAGTATATTCGCACTGA
AAGAGTGGAGCAAGCCTTCAGAGCAATTGATCGTGGAGATTACTATCTGGAAGGCTACAGAGACAATGCTTATAAAGACT
TAGCCTGGAAACATGGAAACATACACTTGTCAGCACCTTGCATTTATTCTGAAGTTATGGAGGCATTGAAACTTCAACCA
GGATTGTCTTTTCTTAACCTGGGAAGTGGAACCGGATATTTAAGTACAATGGTGGGCTTAATTTTAGGTCCTTTTGGAAT
AAATCATGGGATTGAGCTTCATTCAGATGTGGTGGAATATGCCAAGGAAAAACTGGAGAGCTTCATCAAAAATAGTGATA
GCTTTGATAAATTTGAGTTCTGTGAACCTGCATTTGTGGTTGGTAATTGCCTCCAGATAGCATCTGACAGTCATCAGTAT
GATCGAATTTATTGTGGTGCTGGAGTACAGAAAGACCATGAAAACTACATGAAAATTTTACTGAAAGTGGGAGGCATACT
CGTCATGCCTATAGAAGATCAGTTAACACAGATTATGCGAACTGGACAAAACACTTGGGAAAGTAAAAATATCCTTGCTG
TTTCATTTGCTCCACTTGTGCAGCCAAGTAAGAATGATAATGGCAAGCCTGATTCTGTGGGACTCCCCCCCTGTGCTGTC
AGGAACCTGCAGGACTTGGCACGCATTTATATTCGCCGCACACTTAGAAATTTCATCAATGATGAGATGCAGGCCAAGGG
AATTCCCCAAAGGGCTCCACCCAAAAGGAAAAGAAAGAGAGTGAAACAGAGAATTAACACGTATGTCTTTGTGGGTAATC
AGCTTATTCCTCAGCCTCTAGACAGTGAGGAGGATGAGAAAATGGAAGAAGATCACAAGGAAGAGGAGGAGCGAGAGCAC
AGTGAAGCCATGAAGCCAGAAGAACCTCCTCAGAATTTACTGAGAGAGAAAATCATGAAGCTGCCCCTCCCTGAGTCTTT
AAAAGCTTACTTGACGTATTTTAGAGACAAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 131 .95 RPM |
| SRP017611_kidney | 142 .00 RPM |
| SRP017611_brain | 90 .95 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000006593 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000009645 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1571 | 73.08 | 64.99 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_1682 | 73.13 | 55.18 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000016958 retrocopies