Parental gene:

RPE, ENSOCUG00000016995

Aliases:None
Description:ribulose-5-phosphate-3-epimerase [Source:HGNC Symbol;Acc:10293]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:7:150827414..150845082(+)


>ENSOCUG00000016995
ATGGCGTCGGGCTGCAAGATTGGCCCGTCCATCCTCAACAGTGACCTGGCCAACTTAGGGGCCGAGTGCCTCCGGATGCT
AGACTCTGGGGCCGATTACCTGCACCTGGATGCACCCTGCTCTTCAGGGAGGTCAGTTTTTTTGCATTTTGTTCCCAACA
TCACCTTTGGTCACCCTGTGGTAGAAAGCCTCCGAAAGCAGCTAGGCCAGGACCCTTTCTTTGACATGCACATGATGGTC
TCCAGGCCAGAACAGTGGGTAAAGCCAATGGCTGTAGCAGGAGCCAATCAGTATACCTTTCATCTTGAAGCTACTGAGAA
CCCAGGGGCTTTGATTAAAGACATTCGGGAGAATGGTATGAAGGTTGGCCTTGCTATCAAGCCAGGAACTACAGTAGAGT
ATTTGGCACCATGGGCTAATCAGATAGATATGGCCTTGGTTATGACAGTGGAACCTGGTTTTGGAGGACAGAAATTCATG
GAAGATATGATGCCAAAGGTTCACTGGTTGAGGACCCAGTTCCCTTCTTTGGATATAGAGGTCGATGGTGGAGTAGGTCC
TGACACTGTTCATAAGTGTGCAGAGGCAGGAGCTAACATGATTGTGTCTGGCAGTGCCATTATGAAGAGTGAAGACCCCA
GATCTGTGATCAACCTGTTAAGGAATGTTTGTTCAGAAGCTGCTCAGAAACGTTCTCTTGATCGA

Library Parental gene expression (RPM)
SRP017611_liver 9 .17 RPM
SRP017611_kidney 25 .74 RPM
SRP017611_brain 13 .58 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004965 ortholog_one2one 3 retrogenes
retro_amel_1327, retro_amel_1363, retro_amel_827,
Bos taurus ENSBTAG00000047806 ortholog_one2one 2 retrogenes
retro_btau_343, retro_btau_815,
Canis familiaris ENSCAFG00000013811 ortholog_one2one 3 retrogenes
retro_cfam_1441, retro_cfam_1596, retro_cfam_1623,
Choloepus hoffmanni ENSCHOG00000001110 ortholog_one2one 5 retrogenes
retro_chof_1534, retro_chof_2386, retro_chof_392, retro_chof_492, retro_chof_574,
Dasypus novemcinctus ENSDNOG00000003193 ortholog_one2one 1 retrogene
retro_dnov_789,
Equus caballus ENSECAG00000000002 ortholog_one2one 3 retrogenes
retro_ecab_245, retro_ecab_446, retro_ecab_562,
Latimeria chalumnae ENSLACG00000002800 ortholog_one2one 1 retrogene
retro_lcha_21,
Loxodonta africana ENSLAFG00000014127 ortholog_one2one 2 retrogenes
retro_lafr_675, retro_lafr_729,
Macaca mulatta ENSMMUG00000010513 possible_ortholog 2 retrogenes
retro_mmul_366, retro_mmul_618,
Monodelphis domestica ENSMODG00000015827 ortholog_one2one 6 retrogenes
retro_mdom_1181, retro_mdom_1676, retro_mdom_449, retro_mdom_490, retro_mdom_505, retro_mdom_667,
Mustela putorius furo ENSMPUG00000007948 ortholog_one2one 2 retrogenes
retro_mputfur_1066, retro_mputfur_1280,
Pongo abelii ENSPPYG00000013132 possible_ortholog 4 retrogenes
retro_pabe_1052, retro_pabe_1878, retro_pabe_2340, retro_pabe_555,
Pteropus vampyrus ENSPVAG00000014452 ortholog_one2one 2 retrogenes
retro_pvam_217, retro_pvam_636,
Sus scrofa ENSSSCG00000016152 ortholog_one2many 1 retrogene
retro_sscr_825,
Ictidomys tridecemlineatus ENSSTOG00000010322 ortholog_one2one 1 retrogene
retro_itri_1750,
Tursiops truncatus ENSTTRG00000000908 ortholog_one2one 1 retrogene
retro_ttru_158,
Vicugna pacos ENSVPAG00000011585 ortholog_one2one 1 retrogene
retro_vpac_91,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_768 72.79 64.47
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Download FASTA sequences of all ENSOCUG00000016995 retrocopies