Parental gene: | NFS1, ENSOCUG00000017050 |
| Aliases: | None |
| Description: | NFS1 nitrogen fixation 1 homolog (S. cerevisiae) (NFS1), nuclear gene encoding mitochondrial protein, mRNA [Source:RefSeq mRNA;Acc:NM_001171334] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 4:4138044..4171822(+) |
>ENSOCUG00000017050
GTGGTGGGCTCGGCCACCGCGACCATGCTGCTGCGATCCGCCTGGCGGCGGGCGGCCTCGGCGGTGACCGCGGCCCGAGG
GGCGAGGCCTGCGGTGCCCACCCGGGAGCTGCGCCTGCGCGTGGCGGACCATGCTCCCTCAGGCACAGCCGCTGCTCCGG
AGGTGGAGGCAGTGCTGCGACCTCTCTATATGGATGTGCAAGCTACAACTCCTCTGGACCCGCGGGTACTTGATGCCATG
CTTCCTTATCTGGTCAACTACTATGGGAACCCACACTCCCGGACACACGCTTATGGCTGGGAGAGTGAGGCAGCCGTGGA
ACGCGCTCGCCAGCAAGTAGCATCTCTCATTGGAGCTGATCCTCGCGAGATCATTTTCACTAGTGGTGCTACTGAGTCTA
ACAACATAGCAGTTAAGGGAGTGGCCAGGTTCTACAGGTCACGGAAAAAACACTTGATCACCACCCAGACGGAGCACAAA
TGTGTCTTGGACTCCTGCCGTTCACTTGAAGCTGAGGGCTTTAAAGTCACCTACCTCCCCGTGCAGAAGAGTGGGATCAT
TGACCTGCAGGAACTAGAGGCCGCCATCCAGCCAGATACCAGCCTGGTCTCCGTCATGACTGTGAACAATGAAATTGGAG
TGAAGCAGCCTATTGCAGAGATAGGGAGGATTTGCAGTTCCAAAAAAGTATATTTTCATACCGATGCAGCCCAGGCTGTT
GGAAAAATCCCACTGGATGTCAACGACATGAAGATTGATCTCATGAGCATCAGTGGTCACAAAATCTATGGTCCCAAAGG
GGTTGGTGCCATCTACATCCGCCGCCGGCCCCGTGTGCGCGTGGAGGCCCTGCAGAGCGGAGGCGGGCAGGAGCGGGGTC
TGCGGTCTGGGACAGTGCCCACACCCCTGGTGGTGGGGATGGGGGCTGCGTGTGAGGTGGCCCAGCAAGAGATGGAGTAC
GATCACGAGCGGATTTCAAAGTTAGCAGAGCGGCTGACGCAGAAGATAATGAAGAGCCTTCCAGATGTGGTGATGAACGG
AGACCCTGAGCAGCATTACCCTGGTTGTATCAACCTTTCCTTTGCATATGTGGAAGGGGAGAGTCTGCTCATGGCACTTA
AAGATGTCGCCTTATCCTCAGGGAGTGCCTGCACCTCTGCATCGCTGGAGCCCTCTTACGTCCTTAGAGCGATTGGCACC
GATGAGGATTTAGCACACTCTTCTATCAGGTTTGGCATTGGCCGCTTCACTACAGAGGAGGAAGTGGATTTCACGGTAGA
GAAGTGTATTCATCACGTGAAGCGACTTCGAGAAATGAGCCCTCTCTGGGAGATGGTGCAGGATGGCATTGACCTCAAGA
GCATCAAGTGGACCCAACACTAG
GTGGTGGGCTCGGCCACCGCGACCATGCTGCTGCGATCCGCCTGGCGGCGGGCGGCCTCGGCGGTGACCGCGGCCCGAGG
GGCGAGGCCTGCGGTGCCCACCCGGGAGCTGCGCCTGCGCGTGGCGGACCATGCTCCCTCAGGCACAGCCGCTGCTCCGG
AGGTGGAGGCAGTGCTGCGACCTCTCTATATGGATGTGCAAGCTACAACTCCTCTGGACCCGCGGGTACTTGATGCCATG
CTTCCTTATCTGGTCAACTACTATGGGAACCCACACTCCCGGACACACGCTTATGGCTGGGAGAGTGAGGCAGCCGTGGA
ACGCGCTCGCCAGCAAGTAGCATCTCTCATTGGAGCTGATCCTCGCGAGATCATTTTCACTAGTGGTGCTACTGAGTCTA
ACAACATAGCAGTTAAGGGAGTGGCCAGGTTCTACAGGTCACGGAAAAAACACTTGATCACCACCCAGACGGAGCACAAA
TGTGTCTTGGACTCCTGCCGTTCACTTGAAGCTGAGGGCTTTAAAGTCACCTACCTCCCCGTGCAGAAGAGTGGGATCAT
TGACCTGCAGGAACTAGAGGCCGCCATCCAGCCAGATACCAGCCTGGTCTCCGTCATGACTGTGAACAATGAAATTGGAG
TGAAGCAGCCTATTGCAGAGATAGGGAGGATTTGCAGTTCCAAAAAAGTATATTTTCATACCGATGCAGCCCAGGCTGTT
GGAAAAATCCCACTGGATGTCAACGACATGAAGATTGATCTCATGAGCATCAGTGGTCACAAAATCTATGGTCCCAAAGG
GGTTGGTGCCATCTACATCCGCCGCCGGCCCCGTGTGCGCGTGGAGGCCCTGCAGAGCGGAGGCGGGCAGGAGCGGGGTC
TGCGGTCTGGGACAGTGCCCACACCCCTGGTGGTGGGGATGGGGGCTGCGTGTGAGGTGGCCCAGCAAGAGATGGAGTAC
GATCACGAGCGGATTTCAAAGTTAGCAGAGCGGCTGACGCAGAAGATAATGAAGAGCCTTCCAGATGTGGTGATGAACGG
AGACCCTGAGCAGCATTACCCTGGTTGTATCAACCTTTCCTTTGCATATGTGGAAGGGGAGAGTCTGCTCATGGCACTTA
AAGATGTCGCCTTATCCTCAGGGAGTGCCTGCACCTCTGCATCGCTGGAGCCCTCTTACGTCCTTAGAGCGATTGGCACC
GATGAGGATTTAGCACACTCTTCTATCAGGTTTGGCATTGGCCGCTTCACTACAGAGGAGGAAGTGGATTTCACGGTAGA
GAAGTGTATTCATCACGTGAAGCGACTTCGAGAAATGAGCCCTCTCTGGGAGATGGTGCAGGATGGCATTGACCTCAAGA
GCATCAAGTGGACCCAACACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 22 .81 RPM |
| SRP017611_kidney | 98 .72 RPM |
| SRP017611_brain | 19 .87 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Loxodonta africana | ENSLAFG00000010393 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000002777 | within_species_paralog | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000005561 | ortholog_one2one | 1 retrogene | |
| Xenopus tropicalis | ENSXETG00000007430 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1214 | 90.48 | 90.22 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000017050 retrocopies