Parental gene:

SRSF4, ENSOGAG00000015515

Aliases:None
Description:serine/arginine-rich splicing factor 4 [Source:HGNC Symbol;Acc:10786]
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873703.1:2463435..2490834(+)


>ENSOGAG00000015515
ATGCCGCGGGTGTACATCGGCCGCCTGAGCTACCAGGCCCGGGAGCGCGATGTGGAGCGCTTCTTTAAGGGCTATGGAAA
GATCCTGGAAGTGGATCTGAAGAACGGATATGGTTTTGTGGAGTTTGATGATCTGCGTGATGCAGATGATGCTGTTTATG
AACTGAATGGCAAAGACCTTTGTGGTGAGCGAGTAATTGTTGAGCATGCCCGCGGCCCACGTCGAGATGGCAGTTACGGT
TCTGGACGCAGTGGATATGGTTATAGAAGAAGTGGCCGAGATAAATATGGCCCTCCTACCCGCACAGAGTACAGACTTAT
TGTGGAGAATTTGTCAAGTCGGTGCAGCTGGCAAGACCTAAAGGATTATATGCGTCAGGCAGGAGAAGTGACTTATGCAG
ATGCTCACAAGGGACGCAAAAATGAAGGGGTGATTGAATTTGTATCTTATTCCGATATGAAAAGAGCTTTGGAAAAGTTG
GATGGAACTGAAGTCAACGGCAGAAAAATCAGATTAGTTGAAGACAAGCCAGGTTCCAGACGACGCAGATCCTACTCCAG
GAGCCGGAGCCATTCAAGGTCTCGCTCTCGAAGCAGACATTCCCGTAAAAGCAGAAGCCGAAGCGGCAGCAGCAAAAGCA
GTCATTCTAAGAGCAGATCCCGGTCCAGGTCAGGCTCCCACTCCCGGAGCAAGAGCCGCAGCCGCAGCCAGAGCCGCAGC
CGGAGCAAGAAGGAGAAGAGCAGGAGCCCCAGCAAGGACAACAAGAGCCGCAGCCGCAGCCGCAGCCTGGGCAAGAGTCA
CAGCAAGAACAAAGACCAGGCTGAAGAGAAGATCCAGAACAACAACAGCACCGGCAAGTCCAAGAGCCGGAGTCCTAGTA
GGCACAAAAGTAAAAGCAAGAGTCGGAGCCGGAGTCAAGAGCGGAGAGCAGAGGAGGAGAAGCGGGGGAGTGTGAGCAGG
AGCAGGAGCCAGGAGAAGAGCAGGAATCAGGACCACAGCCGGAGCCGCAGCCGTGGGGGCAGCAGGAGCCGCAGCCGCAG
TAAGAGCAAGGACAAGAGCAAGAGCAGGAAGAGAAGCCGGGAGGAGAGCCGCAGCCGCAGTCGCAGCCGCAGCAAGAGCG
AGAGGAGCAGGAAGCGGGGCAGCAAGCGAGACAGCAAGGCAGGCAGCAGCAAGAAGAAGAAGAAGGAAGACACCGACCGC
TCACAGTCGCGATCGCCCTCCCGCTCAGTGTCAAAGGAGCGTGAACACACCAAGTCCGAGTCTGGCCAAAGGGAAGGCCG
AGGGGAGAGTGAGGATGCTGGCACCAATCAGGAGACCCAGTCTAGGTCAAGATCGAATTCCAAATCGAAACCAAACCTTC
CGTCAGAATCACGCTCCAGATCAAAGTCAGCTTCAAAACCCCGATCTCGGTCCAAGTCTCGATCCAGGTCTGCTTCCAGG
TCAGCCTCCCGGTCTAGATCTAGGTCCCACTCAAGGTCC

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013858 ortholog_one2one 1 retrogene
retro_chof_1058,
Callithrix jacchus ENSCJAG00000009971 ortholog_one2many 3 retrogenes
retro_cjac_3688, retro_cjac_3883, retro_cjac_3899,
Microcebus murinus ENSMICG00000008965 ortholog_one2one 1 retrogene
retro_mmur_1597,
Otolemur garnettii ENSOGAG00000000502 other_paralog 6 retrogenes
retro_ogar_1850, retro_ogar_1959, retro_ogar_2131, retro_ogar_2783, retro_ogar_597, retro_ogar_803,
Otolemur garnettii ENSOGAG00000003852 within_species_paralog 1 retrogene
retro_ogar_2328,
Otolemur garnettii ENSOGAG00000010169 other_paralog 2 retrogenes
retro_ogar_3467, retro_ogar_3481,
Otolemur garnettii ENSOGAG00000025950 within_species_paralog 1 retrogene
retro_ogar_2848,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_2205 58.74 57.61
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Download FASTA sequences of all ENSOGAG00000015515 retrocopies