Parental gene: | ENSOGAG00000031106 |
| Aliases: | None |
| Description: | None |
| Organism: | Bushbaby (Otolemur garnettii) |
| Coordinates: | GL873661.1:1904759..1928478(+) |
>ENSOGAG00000031106
CTAGTCAGCATGTCTAACTCAGATGCTCCAGAAGAGAGGCTGAGAAAATTCAAGTACCGAGGCAAAGATGCATCTATGAG
GCGGCAACAGCGGATTGTGGTCAGCCAAAAGCTCCGGAAGGTCAAGAAAGATGAGCAAACTTTCAAAAGAAGAAATATCG
TCAGTTTCTCCCATGACCCAGCTTCTGAAAATCTGGCCGAAGAGATGTCGGTCAGCCTCACTCTGAGTGAAATAATCAAA
GGTGTGAATAGCTCAGATCCCATCCTGAGGTTCCAGGCCACCCAGGAAGCCAGGAAAATGCTGTCCTGGGAAAGAAACCC
CCCTCTAAAATTGGTTGTTGAAGCTGGGCTCATTCCTCGGCTGGTGGAGTTTCTGAAGTCATCACTTTATCCCTGCTTGC
AGTTTGAAGCAGCCTGGGCTCTGACCAACATTGCTTCAGGGACTTCAGAGCAGACCCGAGCAGTCGTGGAAGGGGGCGCT
GTCCAGCCGTTGGTTGAGCTCCTGTCTTCCACCCACATGATTGTGTGTGAACAGGCTGTGTGGGCTCTTGGCAATATAGC
TGGTGATGGCTCAAAGTTCAGAGACATCGTTATCTCAAGTAATGCCATCCCACATCTGCTGGCCCTGATTTCGTCAAACA
TACCAATCACATTTCTACGGAACATCACGTGGACCTTGTCCAACCTGTGCAGAAACAAGAACCCTTACCCTTGCCAAAAA
GCGGTGAAGCAAATGCTGCCAGTCCTCTCCCAACTTCTGCAGCACCATGACAATGAGATTCTCTCCGACACCTGCTGGGC
CCTATCCTACCTCACCGACGGCTGCAACGAGCGCATCGGCGAAGTAGTCAACACTGGGATCCTGCCCAGGCTGGTAGAGC
TCATGACCAGCTCGGAACTCAGTGTCTTGACTCCCTCTCTCCGCACGGTGGGGAACATTGTCACGGGGACAGATCAGCAG
ACCCAGATGGCCATTGATGCAGGCATGCTGAATATACTGCCCCAGCTCCTGCGGCACCCCAAGCCGTCCATCCAGAAGGA
GGCAACCTGGGCCTTGAGCAATGTGGCCGCAGGTCCCCGCCATCACATCCAGCAGCTGATTGCTTGCGACATCCTGCCAT
CCTTGGTGGCTCTATTGAAAAATGGAGAATTTAAAGTCCAGAAAGAGGCTGTTTGGACGGTGGCTAACTTCACAACTGGG
GCAAACATGGACCAGTTGATCCAGCTTGTCCACTCTGGAGTCTTAGAGCCACTGATAAATCTGCTCATTGTCCCAGATGT
TAAAATTGTTCTCATCATCCTTGATATCATCGCTTATATTCTCCAGGCAGCAGAGAAAGTGTCTGAGAAGGAAAATTTGT
GTCTTCTGATAGAAGAACTTGGTGGGATTGATAAAATTGAGGCTTTACAACTTCACGAGAATCATCGGATTGGCCAGACT
GCTCTACGTATCATTGAGAAACACTTTGAGGTAAGTGAC
CTAGTCAGCATGTCTAACTCAGATGCTCCAGAAGAGAGGCTGAGAAAATTCAAGTACCGAGGCAAAGATGCATCTATGAG
GCGGCAACAGCGGATTGTGGTCAGCCAAAAGCTCCGGAAGGTCAAGAAAGATGAGCAAACTTTCAAAAGAAGAAATATCG
TCAGTTTCTCCCATGACCCAGCTTCTGAAAATCTGGCCGAAGAGATGTCGGTCAGCCTCACTCTGAGTGAAATAATCAAA
GGTGTGAATAGCTCAGATCCCATCCTGAGGTTCCAGGCCACCCAGGAAGCCAGGAAAATGCTGTCCTGGGAAAGAAACCC
CCCTCTAAAATTGGTTGTTGAAGCTGGGCTCATTCCTCGGCTGGTGGAGTTTCTGAAGTCATCACTTTATCCCTGCTTGC
AGTTTGAAGCAGCCTGGGCTCTGACCAACATTGCTTCAGGGACTTCAGAGCAGACCCGAGCAGTCGTGGAAGGGGGCGCT
GTCCAGCCGTTGGTTGAGCTCCTGTCTTCCACCCACATGATTGTGTGTGAACAGGCTGTGTGGGCTCTTGGCAATATAGC
TGGTGATGGCTCAAAGTTCAGAGACATCGTTATCTCAAGTAATGCCATCCCACATCTGCTGGCCCTGATTTCGTCAAACA
TACCAATCACATTTCTACGGAACATCACGTGGACCTTGTCCAACCTGTGCAGAAACAAGAACCCTTACCCTTGCCAAAAA
GCGGTGAAGCAAATGCTGCCAGTCCTCTCCCAACTTCTGCAGCACCATGACAATGAGATTCTCTCCGACACCTGCTGGGC
CCTATCCTACCTCACCGACGGCTGCAACGAGCGCATCGGCGAAGTAGTCAACACTGGGATCCTGCCCAGGCTGGTAGAGC
TCATGACCAGCTCGGAACTCAGTGTCTTGACTCCCTCTCTCCGCACGGTGGGGAACATTGTCACGGGGACAGATCAGCAG
ACCCAGATGGCCATTGATGCAGGCATGCTGAATATACTGCCCCAGCTCCTGCGGCACCCCAAGCCGTCCATCCAGAAGGA
GGCAACCTGGGCCTTGAGCAATGTGGCCGCAGGTCCCCGCCATCACATCCAGCAGCTGATTGCTTGCGACATCCTGCCAT
CCTTGGTGGCTCTATTGAAAAATGGAGAATTTAAAGTCCAGAAAGAGGCTGTTTGGACGGTGGCTAACTTCACAACTGGG
GCAAACATGGACCAGTTGATCCAGCTTGTCCACTCTGGAGTCTTAGAGCCACTGATAAATCTGCTCATTGTCCCAGATGT
TAAAATTGTTCTCATCATCCTTGATATCATCGCTTATATTCTCCAGGCAGCAGAGAAAGTGTCTGAGAAGGAAAATTTGT
GTCTTCTGATAGAAGAACTTGGTGGGATTGATAAAATTGAGGCTTTACAACTTCACGAGAATCATCGGATTGGCCAGACT
GCTCTACGTATCATTGAGAAACACTTTGAGGTAAGTGAC
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000015125 | ortholog_one2many | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000004243 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000015943 | ortholog_one2many | 1 retrogene | |
| Equus caballus | ENSECAG00000000554 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000000096 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000185467 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000038770 | ortholog_one2many | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000010827 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000011924 | other_paralog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000027672 | within_species_paralog | 7 retrogenes | |
| Ochotona princeps | ENSOPRG00000015434 | ortholog_one2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000017369 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000019446 | ortholog_one2many | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000009007 | ortholog_one2many | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000002998 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ogar_353 | 53.16 | 75.66 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ogar_1289 | 51.38 | 80.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ogar_3237 | 50.40 | 75.05 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOGAG00000031106 retrocopies