Parental gene: | GXYLT1, ENSPPYG00000004419 |
| Aliases: | None |
| Description: | glucoside xylosyltransferase 1 [Source:HGNC Symbol;Acc:27482] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 12:41445794..41503432(-) |
>ENSPPYG00000004419
ATGCGGCGCTACCTGCGCGTCGTGGTGCTGTGTGTGGCCTGCGGCTTGTGCTCGCTGCTTTACGCCTTCAGCCAGCTCGC
CGTGTCCCTGGAAGAAGGAGCGGGCGGCGGTGGCGGGAAGCCGCAGGCCGCAGTGGCTTCGTGGCTCGCGGGCGGCGGAC
GCGGCGCCGTGAGAGGCGCGGGCACCGCAGCGCGTCCCGGCGGGTCGGACAGGTGTAAAGATTTCCCTCTGTGTTACTGG
AATCCCTATTGGATGCTGCCCTCTGATGTTTGTGGAATGAACTGCTTTTGGGAAGCGGCTTTTAGGTATAGTCTGAAGAT
ACAGCCTGTTGAGAAAATGCATCTAGCTGTAGTTGCCTGTGGTGAAAGACTGGAAGAAACTATGACCATGTTGAAGTCAG
CTATCATTTTCAGCATCAAACCTCTTCAATTCCATATTTTTGCTGAAGATCAGCTACATCATAGCTTTAAAGGCAGACTT
GACAGCTGGTCATTTCTACAAACATTTAATTATACGTTATACCCCATAACCTTTCCAAGTGAGAATGCAGCAGAGTGGAA
AAAACTCTTTAAACCATGTGCTTCGCAGAGATTGTTCTTGCCGTTAATCCTGAAAGAAGTTGACTCACTATTGTATGTCG
ACACTGATATCCTTTTTTTACGACCAGTTGATGATATTTGGTCTTTACTAAAGAAATTTAATTCCACACAAATTGCTGCA
ATGGCACCAGAACATGAGGAACCTCGAATAGGATGGTATAATCGCTTTGCTAGGCATCCATATTATGGAAAAACTGGAGT
AAACTCTGGAGTTATGTTGATGAACATGACTCGAATGAGAAGGAAGTATTTCAAGAATGATATGACAACTGTACGACTAC
AATGGGGAGATATACTTATGCCATTGCTTAAAAAATACAAACTAAACATCACATGGGGTGATCAAGATTTATTGAATATC
ATGTTTTTTCATAATCCAGAAAGCCTTTTTGTTTTTCCATGTCAATGGAATTATCGACCAGATCACTGTATATATGGAAG
CAATTGCCAAGAAGCAGAAGAAGAAGGAATCTTTATTCTTCATGGGAACAGAGGTGTTTACCATGACGATAAGCAACCAG
CATTTAGAGCTGTTTATGAAGCACTGAGAAATTGTTCTTTTGAAGATGACAACATCCGTTCCTTATTAAAACCTTTAGAA
CTGGAACTACAAAAAACAGTGCATACATACTGTGGAAAAATTTACAAAATATTTATCAAACAACTAGCAAAAAGTGTAAG
AGATCGTTATGCCAGATCACCAAAGGAAAAGTGA
ATGCGGCGCTACCTGCGCGTCGTGGTGCTGTGTGTGGCCTGCGGCTTGTGCTCGCTGCTTTACGCCTTCAGCCAGCTCGC
CGTGTCCCTGGAAGAAGGAGCGGGCGGCGGTGGCGGGAAGCCGCAGGCCGCAGTGGCTTCGTGGCTCGCGGGCGGCGGAC
GCGGCGCCGTGAGAGGCGCGGGCACCGCAGCGCGTCCCGGCGGGTCGGACAGGTGTAAAGATTTCCCTCTGTGTTACTGG
AATCCCTATTGGATGCTGCCCTCTGATGTTTGTGGAATGAACTGCTTTTGGGAAGCGGCTTTTAGGTATAGTCTGAAGAT
ACAGCCTGTTGAGAAAATGCATCTAGCTGTAGTTGCCTGTGGTGAAAGACTGGAAGAAACTATGACCATGTTGAAGTCAG
CTATCATTTTCAGCATCAAACCTCTTCAATTCCATATTTTTGCTGAAGATCAGCTACATCATAGCTTTAAAGGCAGACTT
GACAGCTGGTCATTTCTACAAACATTTAATTATACGTTATACCCCATAACCTTTCCAAGTGAGAATGCAGCAGAGTGGAA
AAAACTCTTTAAACCATGTGCTTCGCAGAGATTGTTCTTGCCGTTAATCCTGAAAGAAGTTGACTCACTATTGTATGTCG
ACACTGATATCCTTTTTTTACGACCAGTTGATGATATTTGGTCTTTACTAAAGAAATTTAATTCCACACAAATTGCTGCA
ATGGCACCAGAACATGAGGAACCTCGAATAGGATGGTATAATCGCTTTGCTAGGCATCCATATTATGGAAAAACTGGAGT
AAACTCTGGAGTTATGTTGATGAACATGACTCGAATGAGAAGGAAGTATTTCAAGAATGATATGACAACTGTACGACTAC
AATGGGGAGATATACTTATGCCATTGCTTAAAAAATACAAACTAAACATCACATGGGGTGATCAAGATTTATTGAATATC
ATGTTTTTTCATAATCCAGAAAGCCTTTTTGTTTTTCCATGTCAATGGAATTATCGACCAGATCACTGTATATATGGAAG
CAATTGCCAAGAAGCAGAAGAAGAAGGAATCTTTATTCTTCATGGGAACAGAGGTGTTTACCATGACGATAAGCAACCAG
CATTTAGAGCTGTTTATGAAGCACTGAGAAATTGTTCTTTTGAAGATGACAACATCCGTTCCTTATTAAAACCTTTAGAA
CTGGAACTACAAAAAACAGTGCATACATACTGTGGAAAAATTTACAAAATATTTATCAAACAACTAGCAAAAAGTGTAAG
AGATCGTTATGCCAGATCACCAAAGGAAAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .88 RPM |
| SRP007412_cerebellum | 2 .31 RPM |
| SRP007412_heart | 2 .08 RPM |
| SRP007412_kidney | 1 .39 RPM |
| SRP007412_liver | 1 .41 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000151233 | ortholog_one2one | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000027928 | ortholog_one2one | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000008913 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000036197 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017947 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000004836 | ortholog_one2one | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000005234 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1849 | 78.32 | 51.03 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1976 | 77.43 | 51.03 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000004419 retrocopies