Parental gene: | MRPS31, ENSPPYG00000005306 |
| Aliases: | None |
| Description: | mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:16632] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 13:40657857..40707564(-) |
>ENSPPYG00000005306
ATGTTTCCCAGAGTCTCGACGTTCCTACCTCTTCGCCTCCTTTCCCGCCACCCTTTGTCCTCTGGAAGCCCGGAGACATC
AGCGGCTGCGATTATGCTACTCGCTGTTCGGCACGGAACAGTCAGGACAAAAAATAACATCCAAAGATATTTTGGCACTA
ACAGCGTGATCTGTAGCAAGAAAGATAAGCAGTCTGTTCGAACTGATGAGACTTCCAAGGAGACTTCAGAGAGCCAAGAC
GGTGAAAAGGAAAATACGAAAAAAGACTTGTTAGGCATTATTAAGGGCATGAAAGTTGAATTAAGCACAGTAAATGTACA
AACAACAAAGCCCCCCAAAAGAAGACCACTTAAAAGTTTGGAAACTACAGTTGGCAGGCTTCGAAGAGCTACAGAATATG
CTCCAAAGAAGAGAATTGAGCCCCTGAGTCCTGAGTTGGTGGCAGCTGCATCTGCTGTGGCAGATTCTCTCCCTTTTGAT
AAGCAAACAACCAAGTCAGAGCTGCTGAGCCAGCTGCAGCAGCATGAGGAAGAGTCAAGGGCACAGAGAGATGCAGAGCG
ACCTAAAATTAGTTTCAGTAACATAATATCAGATATGAAAGTTGCCAGATCTGCTACAGCTAGAGTTCGTTCAAGACCAG
AGCTTCAGATTCAGTTTGATGAAGGCTATGACAATTATCCTGGCCAGGAGGAGACCGATGATCATAAAAAAAGGAAAAAT
ATATTCAGAGGGAAAAGACTTAATATTTTTGACATGATGGCAGTTACTAAAGAAGCACCTGAAACAGACACATCACCTTC
ACTTTGGGATGTGGAGTTTGCTAAGCAGTTAGCCACAGTAAATGAACAACCCCTTCAGAATGGATTTGAAGAGCTGATCC
AGTGGACAAAAGAGGGGAAACTATGGGAGTTCCCAATTAACAATGAAGCAGGTTTTGATGATGATGGTTCAGAATTTCAT
GAACATATATTTCTGGAGAAACACCTGGAGAGCTTTCCAAAACAAGGACCAATTCGCCACTTCATGGAGCTGGTGACTTG
TGGCCTTTCCAAAAACCCATATCTTAGTGTTAAACAGAAGGTTGAGCACATAGAGTGGTTTAGAAATTATTTTAATGAAA
AAAAGGATATTCTAAAAGAAAGTAACATACAGTTCAATTAA
ATGTTTCCCAGAGTCTCGACGTTCCTACCTCTTCGCCTCCTTTCCCGCCACCCTTTGTCCTCTGGAAGCCCGGAGACATC
AGCGGCTGCGATTATGCTACTCGCTGTTCGGCACGGAACAGTCAGGACAAAAAATAACATCCAAAGATATTTTGGCACTA
ACAGCGTGATCTGTAGCAAGAAAGATAAGCAGTCTGTTCGAACTGATGAGACTTCCAAGGAGACTTCAGAGAGCCAAGAC
GGTGAAAAGGAAAATACGAAAAAAGACTTGTTAGGCATTATTAAGGGCATGAAAGTTGAATTAAGCACAGTAAATGTACA
AACAACAAAGCCCCCCAAAAGAAGACCACTTAAAAGTTTGGAAACTACAGTTGGCAGGCTTCGAAGAGCTACAGAATATG
CTCCAAAGAAGAGAATTGAGCCCCTGAGTCCTGAGTTGGTGGCAGCTGCATCTGCTGTGGCAGATTCTCTCCCTTTTGAT
AAGCAAACAACCAAGTCAGAGCTGCTGAGCCAGCTGCAGCAGCATGAGGAAGAGTCAAGGGCACAGAGAGATGCAGAGCG
ACCTAAAATTAGTTTCAGTAACATAATATCAGATATGAAAGTTGCCAGATCTGCTACAGCTAGAGTTCGTTCAAGACCAG
AGCTTCAGATTCAGTTTGATGAAGGCTATGACAATTATCCTGGCCAGGAGGAGACCGATGATCATAAAAAAAGGAAAAAT
ATATTCAGAGGGAAAAGACTTAATATTTTTGACATGATGGCAGTTACTAAAGAAGCACCTGAAACAGACACATCACCTTC
ACTTTGGGATGTGGAGTTTGCTAAGCAGTTAGCCACAGTAAATGAACAACCCCTTCAGAATGGATTTGAAGAGCTGATCC
AGTGGACAAAAGAGGGGAAACTATGGGAGTTCCCAATTAACAATGAAGCAGGTTTTGATGATGATGGTTCAGAATTTCAT
GAACATATATTTCTGGAGAAACACCTGGAGAGCTTTCCAAAACAAGGACCAATTCGCCACTTCATGGAGCTGGTGACTTG
TGGCCTTTCCAAAAACCCATATCTTAGTGTTAAACAGAAGGTTGAGCACATAGAGTGGTTTAGAAATTATTTTAATGAAA
AAAAGGATATTCTAAAAGAAAGTAACATACAGTTCAATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 7 .80 RPM |
| SRP007412_cerebellum | 12 .16 RPM |
| SRP007412_heart | 6 .11 RPM |
| SRP007412_kidney | 9 .48 RPM |
| SRP007412_liver | 10 .74 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000008470 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000003600 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000001164 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000021467 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000024374 | ortholog_one2many | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000014606 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000004428 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000007140 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000002170 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000012556 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_3785 | 79.94 | 91.19 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000005306 retrocopies