Parental gene:

ADI1, ENSPPYG00000012683

Aliases:None
Description:acireductone dioxygenase 1 [Source:HGNC Symbol;Acc:30576]
Organism:Orangutan (Pongo abelii)
Coordinates:2a:109384347..109410312(+)


>ENSPPYG00000012683
ATGGTGCAGGCCTGGTATATGGACGACGCCCCGGGCGACCCGCGGCAACCCCACCGCCCCGACCCCGGCCGCCCGGTGGG
CCTGGAGCAGCTGCGGCGGCTCGGGGTGCTCTACTGGAAGCTGGATGCTGACAAATATGAGAATGATCCAGAATTAGAAA
AGATCCGAAGAGAGAGGAACTACTCCTGGATGGACATCATAACCATATGCAAAGATAAACTACCAAATTATGAAGAAAAG
ATTAAGATGTTTTACGAGGAGCATTTGCACTTGGATGATGAGATCCGCTACATCCTGGATGGCAGTGGGTACTTCGATGT
GAGGGACAAGGAGGACAAGTGGATTCGGATCTTCATGGAGAAGGGAGACATGATAACGCTCCCCGCGGGGATCTATCACC
GCTTCACAGTGGACGAGAAGAACTATGCGAAGGCCATGCGGCTATTTGTGGGAGAACCGGTGTGGACAGCATACAACCGG
CCCGCTGACCATTTCGAAGCCCGTGGGCAGTACATGAAATTTCTGGCACAGACGGCCTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 45 .28 RPM
SRP007412_cerebellum 36 .72 RPM
SRP007412_heart 40 .40 RPM
SRP007412_kidney 173 .03 RPM
SRP007412_liver 102 .88 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000018432 ortholog_one2many 2 retrogenes
retro_amel_1306, retro_amel_1350,
Canis familiaris ENSCAFG00000003257 ortholog_one2many 3 retrogenes
retro_cfam_1764, retro_cfam_554, retro_cfam_603,
Choloepus hoffmanni ENSCHOG00000010496 ortholog_one2one 8 retrogenes
retro_chof_1146, retro_chof_1212, retro_chof_1800, retro_chof_2067, retro_chof_2163, retro_chof_401, retro_chof_742, retro_chof_748,
Dasypus novemcinctus ENSDNOG00000007523 ortholog_one2one 3 retrogenes
retro_dnov_181, retro_dnov_1891, retro_dnov_2106,
Equus caballus ENSECAG00000005765 ortholog_one2one 1 retrogene
retro_ecab_870,
Echinops telfairi ENSETEG00000015860 ortholog_one2one 1 retrogene
retro_etel_1732,
Felis catus ENSFCAG00000025763 ortholog_one2many 2 retrogenes
retro_fcat_1465, retro_fcat_882,
Homo sapiens ENSG00000182551 ortholog_one2one 2 retrogenes
retro_hsap_165, retro_hsap_2427,
Gorilla gorilla ENSGGOG00000034855 ortholog_one2one 2 retrogenes
retro_ggor_1510, retro_ggor_250,
Loxodonta africana ENSLAFG00000004902 ortholog_one2one 1 retrogene
retro_lafr_173,
Macaca mulatta ENSMMUG00000019471 ortholog_one2one 1 retrogene
retro_mmul_622,
Monodelphis domestica ENSMODG00000014484 ortholog_one2one 2 retrogenes
retro_mdom_1128, retro_mdom_723,
Nomascus leucogenys ENSNLEG00000007518 ortholog_one2one 2 retrogenes
retro_nleu_1559, retro_nleu_237,
Oryctolagus cuniculus ENSOCUG00000000530 ortholog_one2one 1 retrogene
retro_ocun_1236,
Otolemur garnettii ENSOGAG00000007668 ortholog_one2one 2 retrogenes
retro_ogar_2871, retro_ogar_535,
Pan troglodytes ENSPTRG00000011624 ortholog_one2one 2 retrogenes
retro_ptro_1400, retro_ptro_157,
Pteropus vampyrus ENSPVAG00000003660 ortholog_one2one 1 retrogene
retro_pvam_689,
Rattus norvegicus ENSRNOG00000008950 ortholog_one2one 1 retrogene
retro_rnor_1316,
Tarsius syrichta ENSTSYG00000004138 ortholog_one2one 1 retrogene
retro_tsyr_1271,
Tursiops truncatus ENSTTRG00000005942 ortholog_one2one 2 retrogenes
retro_ttru_1485, retro_ttru_1562,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_463 63.79 63.13
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2. retro_pabe_1789 67.57 100.00
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Download FASTA sequences of all ENSPPYG00000012683 retrocopies