Parental gene: | LANCL3, ENSPTRG00000021790 |
| Aliases: | None |
| Description: | LanC lantibiotic synthetase component C-like 3 (bacterial) [Source:HGNC Symbol;Acc:24767] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | X:37893994..38021302(+) |
>ENSPTRG00000021790
ATGGACACCAAGCGCTGCTTCGCCAATCGCTTCGATGACTACCAGGGCAGCCTGCTGGCGGGCCAGTGTGAGGAGGCGGT
GGCGCCCTTGGTCACCGCCACCATCGAGCGCATCCTCCAGGAGCTTCCCCCACTCGGGGGCGGCGCGGAGGCCCGAGGGG
CGACGGCCGGGGCTAGCGCCTGCCAGGGGGGGCTTTATGGCGGCGTGGCCGGAGTGGCGTATATGCTCTACCACGTCTCG
CAGAGCCCGCTTTTCGCCACGGCCCGGGAACGCTACCTGCGCTCGGCTAAGCGCCTCATCGACGCGTGCGCCCGCGCTGA
GGAGTGGGGCGAACCGGACGCCGACACCCGCGCTGCCTTCCTGCTCGGGGGCGCGGGCGTGTACGCCGTGGCCACGCTCG
TATACCACGCCCTGGGCCGGTCCGACTACGTGCAGCCGCTGGGCAAGTTCCGGGCTCTGTGTGCCGTCTGCGCGCCGGTC
TCCTTCCTGGAGTGCGGCTCCGACGAGCTGTTCGTGGGCCGCGCGGGTTACCTGTGTGCCGCGCTGGTGCTCAAGCAGAA
ACTCGCCCAGGAGGTGCTGACTCCAGCACAGATCAAGTCAATTTGTCAGGCAATTCTGGACTCTGGGAAGCAGTATGCCA
TAAAGAAGAGGAAACCATTCCCCCTGATGTATTCTTACTATGGAACCGAATACTTGGGGGCAGCTCACGGCTTGTCGTCT
ATTCTTCAGATGCTTCTTTCTTACCATGAGCATCTCAAGCCCTCAGATCGGGAATTGGTATGGCAGAGCGTGGACTTTCT
CATGGAACAGGAACAAAACTGCAACTGGCCACCTGAGCTCGGCGAGACCATCGAGAGAGAGAATGAGCTGGTGCACTGGT
GCCATGGCGCTCCAGGAATTGCCTATCTGTTTGCCAAAGCTTATCTGGTTTCCAAGAAACCGCAGTACCTGGACACATGT
ATTCGGTGTGGGGAACTCACATGGCAGAAAGGCCTGCTAAAGAAGGGGCCTGGGATTTGCCATGGAGTAGCCGGCAGTGC
CTATGTCTTCCTGCTGCTGTACCGGCTCACGGGAAACTCTAAATACATCTACCGAGCTCAAAGGTTTGCTCAATTCTTAT
TTACCGAGGAATTCAAGGCCGGTTCTCGGGTCCTTGAAAGTATATACAGCTTGTATGAAGGCTTCTCTGGGACAGTGTGC
TTTCTGATTGACCTGCTGCAGCCCAATCAGGCTGAATTCCCACTCTTCAGCGTCTTTGTTTAG
ATGGACACCAAGCGCTGCTTCGCCAATCGCTTCGATGACTACCAGGGCAGCCTGCTGGCGGGCCAGTGTGAGGAGGCGGT
GGCGCCCTTGGTCACCGCCACCATCGAGCGCATCCTCCAGGAGCTTCCCCCACTCGGGGGCGGCGCGGAGGCCCGAGGGG
CGACGGCCGGGGCTAGCGCCTGCCAGGGGGGGCTTTATGGCGGCGTGGCCGGAGTGGCGTATATGCTCTACCACGTCTCG
CAGAGCCCGCTTTTCGCCACGGCCCGGGAACGCTACCTGCGCTCGGCTAAGCGCCTCATCGACGCGTGCGCCCGCGCTGA
GGAGTGGGGCGAACCGGACGCCGACACCCGCGCTGCCTTCCTGCTCGGGGGCGCGGGCGTGTACGCCGTGGCCACGCTCG
TATACCACGCCCTGGGCCGGTCCGACTACGTGCAGCCGCTGGGCAAGTTCCGGGCTCTGTGTGCCGTCTGCGCGCCGGTC
TCCTTCCTGGAGTGCGGCTCCGACGAGCTGTTCGTGGGCCGCGCGGGTTACCTGTGTGCCGCGCTGGTGCTCAAGCAGAA
ACTCGCCCAGGAGGTGCTGACTCCAGCACAGATCAAGTCAATTTGTCAGGCAATTCTGGACTCTGGGAAGCAGTATGCCA
TAAAGAAGAGGAAACCATTCCCCCTGATGTATTCTTACTATGGAACCGAATACTTGGGGGCAGCTCACGGCTTGTCGTCT
ATTCTTCAGATGCTTCTTTCTTACCATGAGCATCTCAAGCCCTCAGATCGGGAATTGGTATGGCAGAGCGTGGACTTTCT
CATGGAACAGGAACAAAACTGCAACTGGCCACCTGAGCTCGGCGAGACCATCGAGAGAGAGAATGAGCTGGTGCACTGGT
GCCATGGCGCTCCAGGAATTGCCTATCTGTTTGCCAAAGCTTATCTGGTTTCCAAGAAACCGCAGTACCTGGACACATGT
ATTCGGTGTGGGGAACTCACATGGCAGAAAGGCCTGCTAAAGAAGGGGCCTGGGATTTGCCATGGAGTAGCCGGCAGTGC
CTATGTCTTCCTGCTGCTGTACCGGCTCACGGGAAACTCTAAATACATCTACCGAGCTCAAAGGTTTGCTCAATTCTTAT
TTACCGAGGAATTCAAGGCCGGTTCTCGGGTCCTTGAAAGTATATACAGCTTGTATGAAGGCTTCTCTGGGACAGTGTGC
TTTCTGATTGACCTGCTGCAGCCCAATCAGGCTGAATTCCCACTCTTCAGCGTCTTTGTTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .38 RPM |
| SRP007412_cerebellum | 0 .29 RPM |
| SRP007412_heart | 1 .43 RPM |
| SRP007412_kidney | 0 .89 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .21 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macropus eugenii | ENSMEUG00000014625 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000916 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_3193 | 76.38 | 59.05 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000021790 retrocopies