Parental gene: | Srp72, ENSRNOG00000002100 |
| Aliases: | None |
| Description: | signal recognition particle 72 kDa protein [Source:RefSeq peptide;Acc:NP_001164072] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 14:33237744..33351416(-) |
>ENSRNOG00000002100
ATGGCGAGCGGCGGCAGCGGTGGGGTGTCAGTCCCTGCGCTGTGGAGTGAGGTGAACCGTTATGGGCAGAACAGCGACTT
CACGCGTGCCCTCAAGACCGTCAACAAAATATTGCAGATCAACAAGGATGATGTCACGGCCTTGCACTGTAAAGTTGTTT
GCCTTATCCAGAATGGAAGTTTCAAAGAAGCCTTGAATGTCATCAATACTCACACCAAAGTGTTAGCCAATAACTCTCTG
TCCTTTGAGAAGGCATATTGCGAGTACAGGTTGAACAGAATCGAGAATGCCTTGAAGACAATAGAAAGTGCCAACCAGCA
GACAGACAAACTGAAGGAGCTTTATGGACAAGTGCTGTACCGCCTGGAACGCTACGATGAGTGCCTGGCCGTGTACCGAG
ATCTTGTCCGAAACTCCCAGGATGACTACGATGAGGAGAGGAAGACAAACCTGTCAGCAGTCGTTGCCGCTCAAAGCAAC
TGGGAAAAAGTGGTTCCCGAGAACTTGGGTCTCCAAGAAGGCACACACGAACTCTGTTACAACGCTGCGTGTGCACTGAT
AGGGCAAGGCCAGCTGACCCAGGCAATGAAAATCCTACAAAAGGCTGAAGATCTTTGTCGCCGTTCATTTTCAGAAGATT
CAGACGGGACTGAGGAAGACCCTCAGGCCGAGCTGGCCATCATTCACGGTCAAATGGCTTACATCATGCAGCTTCAGGGG
CGCATCGAGGAGGCTCTGCAGCTTTACAATCAGATAATAAAACTGAAGCCAACAGATGTGGCACTTCTTGCTGTAATCGC
AAATAACATCATCACCATTAATAAGGACCAAAATGTCTTTGACTCCAAGAAGAAAGTGAAATTAACCAATGCAGAAGGAG
TGGAGTTTAAGCTCTCCAAGAGACAGCTTCAAGCCATAGAGTTCAACAAGGCTTTGCTTGCCATGTATACAAACCAGGCA
GAACGATGCCGAAAAATAGCTTCTAGCTTGCAGTCCCAGAGTCCTGAGCATCTCCTGCCTGTGCTGATCCAAGCTGCCCA
GCTCTGTCGTGAAAAGCAGCATACAAAGGCAATAGAGCTGCTTCAGGAATTTTCTGATCAACATCCAGAAAATGCAGCTG
AAATCAAGCTTACCATGGCTCAATTGAAAATTTCCCAAGGTAATATTTCCAAAGCGTGCCTAATACTGAGAAGCATAGAG
GAATTAAAGCATAAGTCAGGCATGGTATCCGCGTTGGTGACCATGTACAGCCACGAGGAAGACTTTGAGAGTGCCATTGA
AGTCTTCACACAGGCTATCCAGTGGTATCAAAGCCATCAGTCCAAGTCCCCTGCTCATTTGTCCTTGATAAGAGAGGCTG
CAAAGTTCAAGCTCAAATATGAACGGAAGAAGGAGGCAGTTAGTGACCTAGAGCAGCTGTGGAAACAAAATTCAAAAGAT
ATTCACACGCTAGCCCAGCTTATCTCTGCTTACTCGCTTGTGGATCCAGAGAAAGCAAAGGCTCTTAGTAAACACCTGCC
CTCATCGGATAGTATGTCTCTAAAGGTAGATGTTGAGGCTCTTGAGAATTCTCCTGGTGCTACATACATTCGGAAGAAGG
GTGGAAAAGTTACTGGAGATAATCAACCAAAGGAACAAGGACAGGGAGATTTGACAAAGAAGAAGAAAAAGAAAGGAAAA
CTGCCTAAGAATTATGACCCAAAAGTTACCCCAGATCCAGAAAGACGGCTACCAATGCGAGAGTGCTCTTACTACCGAGG
AAGAAAGAAGGGCAAAAAGAAGGACCAGATCGGAAAAGGAACACAGGGAGCGATCGCAGGAGCCTCCTCTGAGTTGGACG
CCAGTAAAACTGTGAGCAGCCCACCCACCTCCCCAAGACCTGGCAGTGCGGCAACGATGGCCTCCTCTACAAGTAACATT
GTACCCCCAAGACACCAGAAACCCGCAGGGGCCCCAGCAACGAAAAAGAAGCAGCAACAGAAGAAGAAGAAAGGAGGGAA
AAGTGGTTGGTGA
ATGGCGAGCGGCGGCAGCGGTGGGGTGTCAGTCCCTGCGCTGTGGAGTGAGGTGAACCGTTATGGGCAGAACAGCGACTT
CACGCGTGCCCTCAAGACCGTCAACAAAATATTGCAGATCAACAAGGATGATGTCACGGCCTTGCACTGTAAAGTTGTTT
GCCTTATCCAGAATGGAAGTTTCAAAGAAGCCTTGAATGTCATCAATACTCACACCAAAGTGTTAGCCAATAACTCTCTG
TCCTTTGAGAAGGCATATTGCGAGTACAGGTTGAACAGAATCGAGAATGCCTTGAAGACAATAGAAAGTGCCAACCAGCA
GACAGACAAACTGAAGGAGCTTTATGGACAAGTGCTGTACCGCCTGGAACGCTACGATGAGTGCCTGGCCGTGTACCGAG
ATCTTGTCCGAAACTCCCAGGATGACTACGATGAGGAGAGGAAGACAAACCTGTCAGCAGTCGTTGCCGCTCAAAGCAAC
TGGGAAAAAGTGGTTCCCGAGAACTTGGGTCTCCAAGAAGGCACACACGAACTCTGTTACAACGCTGCGTGTGCACTGAT
AGGGCAAGGCCAGCTGACCCAGGCAATGAAAATCCTACAAAAGGCTGAAGATCTTTGTCGCCGTTCATTTTCAGAAGATT
CAGACGGGACTGAGGAAGACCCTCAGGCCGAGCTGGCCATCATTCACGGTCAAATGGCTTACATCATGCAGCTTCAGGGG
CGCATCGAGGAGGCTCTGCAGCTTTACAATCAGATAATAAAACTGAAGCCAACAGATGTGGCACTTCTTGCTGTAATCGC
AAATAACATCATCACCATTAATAAGGACCAAAATGTCTTTGACTCCAAGAAGAAAGTGAAATTAACCAATGCAGAAGGAG
TGGAGTTTAAGCTCTCCAAGAGACAGCTTCAAGCCATAGAGTTCAACAAGGCTTTGCTTGCCATGTATACAAACCAGGCA
GAACGATGCCGAAAAATAGCTTCTAGCTTGCAGTCCCAGAGTCCTGAGCATCTCCTGCCTGTGCTGATCCAAGCTGCCCA
GCTCTGTCGTGAAAAGCAGCATACAAAGGCAATAGAGCTGCTTCAGGAATTTTCTGATCAACATCCAGAAAATGCAGCTG
AAATCAAGCTTACCATGGCTCAATTGAAAATTTCCCAAGGTAATATTTCCAAAGCGTGCCTAATACTGAGAAGCATAGAG
GAATTAAAGCATAAGTCAGGCATGGTATCCGCGTTGGTGACCATGTACAGCCACGAGGAAGACTTTGAGAGTGCCATTGA
AGTCTTCACACAGGCTATCCAGTGGTATCAAAGCCATCAGTCCAAGTCCCCTGCTCATTTGTCCTTGATAAGAGAGGCTG
CAAAGTTCAAGCTCAAATATGAACGGAAGAAGGAGGCAGTTAGTGACCTAGAGCAGCTGTGGAAACAAAATTCAAAAGAT
ATTCACACGCTAGCCCAGCTTATCTCTGCTTACTCGCTTGTGGATCCAGAGAAAGCAAAGGCTCTTAGTAAACACCTGCC
CTCATCGGATAGTATGTCTCTAAAGGTAGATGTTGAGGCTCTTGAGAATTCTCCTGGTGCTACATACATTCGGAAGAAGG
GTGGAAAAGTTACTGGAGATAATCAACCAAAGGAACAAGGACAGGGAGATTTGACAAAGAAGAAGAAAAAGAAAGGAAAA
CTGCCTAAGAATTATGACCCAAAAGTTACCCCAGATCCAGAAAGACGGCTACCAATGCGAGAGTGCTCTTACTACCGAGG
AAGAAAGAAGGGCAAAAAGAAGGACCAGATCGGAAAAGGAACACAGGGAGCGATCGCAGGAGCCTCCTCTGAGTTGGACG
CCAGTAAAACTGTGAGCAGCCCACCCACCTCCCCAAGACCTGGCAGTGCGGCAACGATGGCCTCCTCTACAAGTAACATT
GTACCCCCAAGACACCAGAAACCCGCAGGGGCCCCAGCAACGAAAAAGAAGCAGCAACAGAAGAAGAAGAAAGGAGGGAA
AAGTGGTTGGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 30 .79 RPM |
| SRP017611_kidney | 31 .05 RPM |
| SRP017611_brain | 33 .72 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000017998 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000174780 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000008806 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000012226 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_587 | 98.19 | 98.96 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000002100 retrocopies