Parental gene: | Zc3h11a, ENSRNOG00000002993 |
| Aliases: | Zc3h11a, RGD1308290 |
| Description: | zinc finger CCCH domain-containing protein 11A [Source:RefSeq peptide;Acc:NP_001041367] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 13:55250212..55288525(+) |
>ENSRNOG00000002993
ATGCCTAATCAGGGAGAAGACTGCTATTTTTATTTCTATTCTACATGCACCAAAGGTGACAGCTGCCCATTCCGTCACTG
TGAAGCTGCACTAGGAAATGAAACTGTTTGCACACTATGGCAGGAAGGTCGTTGTTTTCGACAGGTGTGCAGATTTCGCC
ACATGGAAATTGACAAAAAACGAAGTGAAATTCCTTGTTATTGGGAAAACCAGCCAATGGGATGTCAAAAATTAAATTGC
GCTTTCCATCACAACAGAAGTCGTTATGTCGATGGACTGTTCCTACCTCCAAGCAAAACTGTGTTACCCACTGTGCCTGA
GTCACAAGAAGAGGAAGTAAAGACGAGCCAGCTCATGGTTCAACAGAACAAATTGTCTGTTCAGTCCAACCCCTGCCCTC
AGCTGCGGAGCGTGATGAAAGTGGAGAGTTCGGAAAACGTTCCCAGCCCCACACACCCGCCTGTCGTGATCAATGCTGCC
GATGATGATGAAGATGACGACGATCAGTTTTCTGAGGAGGGTGATGAGAGCAAAACACCTGCCCTGCAGCCAACAACGGA
CGCCCATAATGGACTACGAGTGGCCTCTACCCGCAAACCTGGAGCCAGCTTAAAGCCAGGTGACTCTTTGAATTTTGGAA
TAAAAACGCTTGAGGAAATTAAATCAAAGAAAATGAAGGAAAAATCCAAGAAGCAAGGTGAAGGCTCCTCGGGAATGTCC
AGTGTTTTACATCAGCCTCAGCCCAATCCAGGCCCTGAGAAGGAGAATGTTCGGACTGTGGTGAGAACCGTAACTCTGTC
AAGCAAACAAGAAGAGCCCTTGGTTAGACTGAGTCTTACTGAGAGACTGGGGAAACGAAAACTTCCAGGAGGTGGTGACA
ATGATCCCCCATTAAAGCGAAGTCTTGCACAGAGACTGGGAAAAAAAGTGGAAGCACCAGAAACTAACATTGATAAAGCA
CCAAAGAAAGATGAACAAGAGAGAGTTAATAAAACTGGTGAGATCCATGTTAAGACACTGGAAGAAATTCTTCTTGAAAG
AGCCAATCAGAAACGTGGAGAATTGCAAACTAAACTAAAGACAGAAGAACCTTCAGGAGCTGAGGATTCTCCATCAGGAA
CAAAAAGTTCTTCAGTGCGGATCAAAACCTTCTCTGAGGTCCTGGCTGAAAAGAAACATCGGCAGCAGGAAATGGAAAGA
CAGAAATCCAAAAAGGATACAAGTTGCCTCATGCTAACAGAAGATTCTGAAGTGAAAAAGACTGTGAGCCTGCCGACTGT
TGCTGTTAGCAAAGGACAGCTTGAGGAGGAGCCTGCAGGCAGAGCCAGGCCTATGCAGGAGGTGCATATTAAGACGCTAG
AGGAAATTAAGCTGGAAAAGGCCCTGAGGGTGCAGCAAAGCGCTGAGAGGAGTGGCAGCTCCCGGCCTCAAGCGGAGGCT
GCCCCAGTGGCCAAGAGGCTGCTGCGCATCACCAAGAGATCAGGTACAAGAGAAGAGAAAAAACTTGAACTTGAGGACAA
TGGTGGCGCTCCCTCTCAGAGCAGTGTGACTAAGATGGGAGTTAGTGAGACTTCAGATGAGACCATAAGTGATCCCACAA
AACTTCCAGTCAACAGATGTGACATTGTCAAAGAGAAACACACACAGAGACAGCAGGAGAGAGGAGCGTCACAAAAGGAG
AAGCCAGCCTTGGCATCTGTGCGGACAGATGAGGCTTCTTACTATACCCGAGTGGTGGGGAAGCCGGTGCTCACTGCTGT
ATCGGGCGTCACTCGGCACCTGGCAAAACGGCTCCCCACGGAGTCATCCCAGAAAGGGGAGGTGGAGACCTCCGGGATTG
GAGACTCAATACTGCACGTGAAGTGTGCGGCACAGACTCTGGAGAAAAGGGGTAAAGCCAAGCCCAAAGTAAATGTGAAG
CCATCTGTGGTCAAGGTTGTCTCAGCCCCCAAATTGGCTCCTAAGCGCAAGGCTGTGGAGGTGCACTCTGCTGTCATCGC
AGCTGTGAAGCCGCTCAGCTCCAGCAGTGTCCTGCAGGAAAGCCCCGCCAAGAAAGCAGCCGTGAAAGTAAGAAAGATCC
TAGGTTATCCAAGATCTCCAACCATGCCAAAAGACAGTTCTGCGCTGTCTTCAGCCCAAGCTTCTTCAGAACCCTTGCTC
CCCGAAGGCTCTGGCCCTTCCTCATCCCAGATGGCAACGAAACCTCGCCGGCTGAGCTCGGCCTCCACAGGAAAGCCTCC
ACTCTCCGTGGAAGATGACTTTGAGAAACTAATATGGGAAATTTCAGGGGGCAAATTAGAAGCTGAGATTGACTTGGATC
CTGGGAAAGATGAAGACGACCTTCTGCTTGAGCTCTCAGAGATGATTGACAGCTGA
ATGCCTAATCAGGGAGAAGACTGCTATTTTTATTTCTATTCTACATGCACCAAAGGTGACAGCTGCCCATTCCGTCACTG
TGAAGCTGCACTAGGAAATGAAACTGTTTGCACACTATGGCAGGAAGGTCGTTGTTTTCGACAGGTGTGCAGATTTCGCC
ACATGGAAATTGACAAAAAACGAAGTGAAATTCCTTGTTATTGGGAAAACCAGCCAATGGGATGTCAAAAATTAAATTGC
GCTTTCCATCACAACAGAAGTCGTTATGTCGATGGACTGTTCCTACCTCCAAGCAAAACTGTGTTACCCACTGTGCCTGA
GTCACAAGAAGAGGAAGTAAAGACGAGCCAGCTCATGGTTCAACAGAACAAATTGTCTGTTCAGTCCAACCCCTGCCCTC
AGCTGCGGAGCGTGATGAAAGTGGAGAGTTCGGAAAACGTTCCCAGCCCCACACACCCGCCTGTCGTGATCAATGCTGCC
GATGATGATGAAGATGACGACGATCAGTTTTCTGAGGAGGGTGATGAGAGCAAAACACCTGCCCTGCAGCCAACAACGGA
CGCCCATAATGGACTACGAGTGGCCTCTACCCGCAAACCTGGAGCCAGCTTAAAGCCAGGTGACTCTTTGAATTTTGGAA
TAAAAACGCTTGAGGAAATTAAATCAAAGAAAATGAAGGAAAAATCCAAGAAGCAAGGTGAAGGCTCCTCGGGAATGTCC
AGTGTTTTACATCAGCCTCAGCCCAATCCAGGCCCTGAGAAGGAGAATGTTCGGACTGTGGTGAGAACCGTAACTCTGTC
AAGCAAACAAGAAGAGCCCTTGGTTAGACTGAGTCTTACTGAGAGACTGGGGAAACGAAAACTTCCAGGAGGTGGTGACA
ATGATCCCCCATTAAAGCGAAGTCTTGCACAGAGACTGGGAAAAAAAGTGGAAGCACCAGAAACTAACATTGATAAAGCA
CCAAAGAAAGATGAACAAGAGAGAGTTAATAAAACTGGTGAGATCCATGTTAAGACACTGGAAGAAATTCTTCTTGAAAG
AGCCAATCAGAAACGTGGAGAATTGCAAACTAAACTAAAGACAGAAGAACCTTCAGGAGCTGAGGATTCTCCATCAGGAA
CAAAAAGTTCTTCAGTGCGGATCAAAACCTTCTCTGAGGTCCTGGCTGAAAAGAAACATCGGCAGCAGGAAATGGAAAGA
CAGAAATCCAAAAAGGATACAAGTTGCCTCATGCTAACAGAAGATTCTGAAGTGAAAAAGACTGTGAGCCTGCCGACTGT
TGCTGTTAGCAAAGGACAGCTTGAGGAGGAGCCTGCAGGCAGAGCCAGGCCTATGCAGGAGGTGCATATTAAGACGCTAG
AGGAAATTAAGCTGGAAAAGGCCCTGAGGGTGCAGCAAAGCGCTGAGAGGAGTGGCAGCTCCCGGCCTCAAGCGGAGGCT
GCCCCAGTGGCCAAGAGGCTGCTGCGCATCACCAAGAGATCAGGTACAAGAGAAGAGAAAAAACTTGAACTTGAGGACAA
TGGTGGCGCTCCCTCTCAGAGCAGTGTGACTAAGATGGGAGTTAGTGAGACTTCAGATGAGACCATAAGTGATCCCACAA
AACTTCCAGTCAACAGATGTGACATTGTCAAAGAGAAACACACACAGAGACAGCAGGAGAGAGGAGCGTCACAAAAGGAG
AAGCCAGCCTTGGCATCTGTGCGGACAGATGAGGCTTCTTACTATACCCGAGTGGTGGGGAAGCCGGTGCTCACTGCTGT
ATCGGGCGTCACTCGGCACCTGGCAAAACGGCTCCCCACGGAGTCATCCCAGAAAGGGGAGGTGGAGACCTCCGGGATTG
GAGACTCAATACTGCACGTGAAGTGTGCGGCACAGACTCTGGAGAAAAGGGGTAAAGCCAAGCCCAAAGTAAATGTGAAG
CCATCTGTGGTCAAGGTTGTCTCAGCCCCCAAATTGGCTCCTAAGCGCAAGGCTGTGGAGGTGCACTCTGCTGTCATCGC
AGCTGTGAAGCCGCTCAGCTCCAGCAGTGTCCTGCAGGAAAGCCCCGCCAAGAAAGCAGCCGTGAAAGTAAGAAAGATCC
TAGGTTATCCAAGATCTCCAACCATGCCAAAAGACAGTTCTGCGCTGTCTTCAGCCCAAGCTTCTTCAGAACCCTTGCTC
CCCGAAGGCTCTGGCCCTTCCTCATCCCAGATGGCAACGAAACCTCGCCGGCTGAGCTCGGCCTCCACAGGAAAGCCTCC
ACTCTCCGTGGAAGATGACTTTGAGAAACTAATATGGGAAATTTCAGGGGGCAAATTAGAAGCTGAGATTGACTTGGATC
CTGGGAAAGATGAAGACGACCTTCTGCTTGAGCTCTCAGAGATGATTGACAGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 47 .00 RPM |
| SRP017611_kidney | 52 .69 RPM |
| SRP017611_brain | 48 .89 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000058673 | ortholog_one2many | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000001184 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000026464 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000000243 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000001876 | ortholog_one2many | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_602 | 91.96 | 90.39 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_1570 | 92.21 | 90.39 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_1673 | 91.94 | 90.39 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000002993 retrocopies