Parental gene: | Pwp1, ENSRNOG00000005350 |
| Aliases: | Pwp1, RGD1310705 |
| Description: | periodic tryptophan protein 1 homolog [Source:RefSeq peptide;Acc:NP_001178806] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 7:24138855..24154854(-) |
>ENSRNOG00000005350
ATGAACCGCAGCCGCCAAGTGACCTGCGTGGCCTGGGTCCGCCGCGGCGTGGCCAAAGAGACGCCAGACAAGGTAGAGCT
AAGTAAAGAGGAAGTGAAACGTCTCATTGCTGAAGCAAAAGAAAAGTTACAAGAGGAGGGTGGGAGTGAGGAAGAGGAGG
TAGGCAGTCCTTCAGAAGATGGCATGCAGAGAGCCCGGGTCCAGGCCCGGCCTACGGAGCCGCTGGAGGATGGGGATCCA
CAAGACGACCGTACACTGGACGACGATGAGCTGGCGGAGTACGACTTAGATAACTATGACCAAGAGGACAACCCAGATGC
TGAGACCATTGGAGAATCTCTGTTGGGGCTTACGGTCTATGGCAGTAACGATCAGGATCCATACGTCACCCTCAAAGACA
CGGAACAGTACGAGCACGAAGACTTCTTGATTAAGCCGACCGACAACCTCATCGTCTGTGGCCGTGCAGAACAAGAGCAG
TGTAACTTAGAGGTGCACGTGTACAATCAAGAAGAGGAGTCTTTCTATGTCCACCATGACATACTCCTGTCTGCATATCC
TCTAAGTGTGGAATGGCTGAATTTTGATCCTAGCCCAGATGCGGCTACTGGAAATTACATTGCTGTGGGAAACATGACCC
CTGTCATTGAGGTGTGGGACCTGGATATCGTGGACTCTCTAGAACCAGTCTTCACACTGGGAAGCAAGCTTTCAAAAAAG
AAGAAGAAGAAAGGGAAAAAGAGTTCGTCAGCAGAAGGACATACTGATGCTGTCCTTGACCTTTCCTGGAATAAGACAGT
CAGAAACGTGCTGGCGAGTGCATCAGCAGACAGCACTGTAATCCTGTGGGATCTGTCTGTGGGGAAGCCAGCGGCCAGGC
TTACTGCACATACAGACAAGGTTCAGACTCTGCAGTTTCATCCATTTGAAGCACAGACTCTGATTTCTGGGTCCTATGAC
AAATCCGTGGCTCTGTACGACTGCAGAGACCCCAGCCAGAACCACCGTCTGTGGAGGTTTAGTGGGCAGATCGAGAGAGT
GACCTGGAACCACTTCTCACCGTGCCATTTCTTGGCCAGTACAGATGATGGCTTTGTATATAATCTGGATGCGCGCTCAG
ATAAGCCGATTTTTACACTTAATGCACACAACGATGAAATCTCTGGTCTTGATCTGAGCAGTCAGATCAAAGGCTGCCTT
GTGACCGCTTCAGCAGACAAATTTGTGAAGATCTGGGACATCTTAGGAGAGAGGCCAAGTCTCATTCATTCTAGAGACAT
GAAGATGGGAGTTCTCTTTTGTTCTTCATGCTGCCCTGATTTGCCGTTTGTTTACGCCTTTGGAGGACAGAAAGAAGGGC
TTCGGGTTTGGGACATAAGCACTGTGTCTTCAGTAAACGAAGCGTTTGGAAGACGGGAGAGACTGGCCATTGGCAGCACA
AAAGGTTTATCTGTTAGTGACCCCTGTAGGAGCGGGAGCCCACAGACACCAATGGAGTCCTGA
ATGAACCGCAGCCGCCAAGTGACCTGCGTGGCCTGGGTCCGCCGCGGCGTGGCCAAAGAGACGCCAGACAAGGTAGAGCT
AAGTAAAGAGGAAGTGAAACGTCTCATTGCTGAAGCAAAAGAAAAGTTACAAGAGGAGGGTGGGAGTGAGGAAGAGGAGG
TAGGCAGTCCTTCAGAAGATGGCATGCAGAGAGCCCGGGTCCAGGCCCGGCCTACGGAGCCGCTGGAGGATGGGGATCCA
CAAGACGACCGTACACTGGACGACGATGAGCTGGCGGAGTACGACTTAGATAACTATGACCAAGAGGACAACCCAGATGC
TGAGACCATTGGAGAATCTCTGTTGGGGCTTACGGTCTATGGCAGTAACGATCAGGATCCATACGTCACCCTCAAAGACA
CGGAACAGTACGAGCACGAAGACTTCTTGATTAAGCCGACCGACAACCTCATCGTCTGTGGCCGTGCAGAACAAGAGCAG
TGTAACTTAGAGGTGCACGTGTACAATCAAGAAGAGGAGTCTTTCTATGTCCACCATGACATACTCCTGTCTGCATATCC
TCTAAGTGTGGAATGGCTGAATTTTGATCCTAGCCCAGATGCGGCTACTGGAAATTACATTGCTGTGGGAAACATGACCC
CTGTCATTGAGGTGTGGGACCTGGATATCGTGGACTCTCTAGAACCAGTCTTCACACTGGGAAGCAAGCTTTCAAAAAAG
AAGAAGAAGAAAGGGAAAAAGAGTTCGTCAGCAGAAGGACATACTGATGCTGTCCTTGACCTTTCCTGGAATAAGACAGT
CAGAAACGTGCTGGCGAGTGCATCAGCAGACAGCACTGTAATCCTGTGGGATCTGTCTGTGGGGAAGCCAGCGGCCAGGC
TTACTGCACATACAGACAAGGTTCAGACTCTGCAGTTTCATCCATTTGAAGCACAGACTCTGATTTCTGGGTCCTATGAC
AAATCCGTGGCTCTGTACGACTGCAGAGACCCCAGCCAGAACCACCGTCTGTGGAGGTTTAGTGGGCAGATCGAGAGAGT
GACCTGGAACCACTTCTCACCGTGCCATTTCTTGGCCAGTACAGATGATGGCTTTGTATATAATCTGGATGCGCGCTCAG
ATAAGCCGATTTTTACACTTAATGCACACAACGATGAAATCTCTGGTCTTGATCTGAGCAGTCAGATCAAAGGCTGCCTT
GTGACCGCTTCAGCAGACAAATTTGTGAAGATCTGGGACATCTTAGGAGAGAGGCCAAGTCTCATTCATTCTAGAGACAT
GAAGATGGGAGTTCTCTTTTGTTCTTCATGCTGCCCTGATTTGCCGTTTGTTTACGCCTTTGGAGGACAGAAAGAAGGGC
TTCGGGTTTGGGACATAAGCACTGTGTCTTCAGTAAACGAAGCGTTTGGAAGACGGGAGAGACTGGCCATTGGCAGCACA
AAAGGTTTATCTGTTAGTGACCCCTGTAGGAGCGGGAGCCCACAGACACCAATGGAGTCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 8 .74 RPM |
| SRP017611_kidney | 17 .17 RPM |
| SRP017611_brain | 11 .93 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macaca mulatta | ENSMMUG00000015544 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000031574 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000001785 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000011940 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000011036 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_646 | 78.95 | 56.60 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000005350 retrocopies