Parental gene: | Wbp11, ENSRNOG00000005505 |
| Aliases: | None |
| Description: | WW domain-binding protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q5PQQ2] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 4:234414448..234427819(-) |
>ENSRNOG00000005505
ATGGGACGAAGATCAACATCCTCCACCAAGAGTGGGAAGTTTATGAACCCCACAGACCAAGCCCGAAAAGAAGCCCGGAA
AAGAGAGTTGAAAAAGAACAAAAAACAGCGCATGATGGTCCGAGCTGCAGTTTTGAAGATGAAAGACCCCAAGCAGATTA
TCCGGGACATGGAGAAATTGGATGAAATGGAGTTTAACCCAGTGCAACAGCCGCAGTTGAATGAAAAAGTACTGAAAGAC
AAGCGTAAAAAGCTGCGAGAAACCTTTGAACGAATTCTGCGGCTCTATGAGAAAGAAAACCCAGACATCTACAAAGAGCT
GAGGAAGCTGGAAGTGGAGTACGAGCAGAAGAGGGCGCAGCTGAGCCAGTACTTTGATGCCGTCAAGAACGCCCAGCATG
TGGAAGTAGAGAGCATCCCTCTGCCAGATATGCCGCATGCCCCTTCCAACATCCTGATCCAGGACATTCCTCTTCCTGGT
GCCCAGCCACCCTCTATCCTGAAGAAAACCTCGGCATATGGGCCTCCAACTCGAGCAGTTTCTATCCTTCCTCTCCTGGG
ACACGGTGTTCCACGTTTGCCCCCTGGCAGAAAACCGCCTGGCCCTCCACCTGGCCCACCTCCTCCTCAAGTTCTGCAGA
TGTATGGCCGTAAAGTGGGCTTTGCTCTCGATCTTCCCCCTCGGAGGCGAGATGAAGACATGCTGTACAGTCCGGAACTT
GCTCAGCGGGGCCATGATGATGACATGTCCAGCACCAGTGAGGACGACGGCTATCCTGAGGACATGGATCAGGATAAGCA
CGATGACAGTACTGAGGACAGTGACACTGACAGATCCGATGCAGAAAGTGATGGGGATGAGTTCGGCCACCGTGACGACA
GTGAGCGTGACAACACTGAGGAGAAGAAGTCAGGTCTGAGCGTCCGGTTTGCAGATATGCCTGGGAAATCTAGGAAGAAG
AAGAAGAACATGAAGGAGCTGACTCCTCTTCAAGCCATGATGCTGCGAATGGCAGGTCAGGAAATCCCTGAGGAAGGACG
GGAAGTGGAGGAGTTTTCAGAGGAGGAGGACGACGACGACTCTGAGGACTCTGAGGCAGAGAAGCCATCGCAGAAGCAGC
ATAAAGAGGATTCCCACGCTGACGGCTCCTCGGCCGCCTCTTCACAGCAGCAGGCCCCTCCACAGGCCGTTCCTCCTTCT
CAGATACAAGCACCTCCCATGCCAGGACCGCCACCTCTCGGACCACCGCCTGCCCCACCCTTACGGCCTCCTGGACCACC
TACAGGCCTTCCTCCTGGGCCACCTCCAGGGGCTCCTCCATTCCTGAGACCACCTGGGATGCCAGGAATCCGAGGGCCTT
TACCACGGCTTTTACCTCCAGGACCACCACCAGGCCGACCTCCTGGCCCTCCGCCAGGCCCACCTCCAGGTCTCCCCCCT
GGGCCCCCTCCTCGAGGACCCCCACCAAGGCTACCTCCTCCTGCACCTCCAGGTATCCCTCCTCCTCGTCCTGGCATGAT
GCGCCCTCCGTTGGTGCCTCCTCTTGGACCTGCCCCGCCTGGCCTTTTCCCGCCAGCTCCCTTACCCAACCCAGGGGTGT
TGAGTGCCCCACCCAGCCTCATTCAGCGACCGAAGGCGGATGATGCAAGTGCAGCCACCATCGAGAAGAAGGCCACAGCG
ACCATCAGTGCCAAGCCCCAGATCACCAATCCCAAGGCAGAGGTCACACGGTTTGTGCCCACTGCACTGAGGGTGCGCCG
CGAGAATAAGGGGGCTACTGCCGTTCCCCAAAGAAGGTCAGAGGAGGACTCTGCTGTGCCTGTGGCCAAAGCAGCCCCCA
GATCTGGGCCTTCAGTTCCTGTGTCGGTACAGACTAAGGACGATGTCTATGAAGCGTTTATGAAAGAGATGGAAGGGCTG
CTGTGA
ATGGGACGAAGATCAACATCCTCCACCAAGAGTGGGAAGTTTATGAACCCCACAGACCAAGCCCGAAAAGAAGCCCGGAA
AAGAGAGTTGAAAAAGAACAAAAAACAGCGCATGATGGTCCGAGCTGCAGTTTTGAAGATGAAAGACCCCAAGCAGATTA
TCCGGGACATGGAGAAATTGGATGAAATGGAGTTTAACCCAGTGCAACAGCCGCAGTTGAATGAAAAAGTACTGAAAGAC
AAGCGTAAAAAGCTGCGAGAAACCTTTGAACGAATTCTGCGGCTCTATGAGAAAGAAAACCCAGACATCTACAAAGAGCT
GAGGAAGCTGGAAGTGGAGTACGAGCAGAAGAGGGCGCAGCTGAGCCAGTACTTTGATGCCGTCAAGAACGCCCAGCATG
TGGAAGTAGAGAGCATCCCTCTGCCAGATATGCCGCATGCCCCTTCCAACATCCTGATCCAGGACATTCCTCTTCCTGGT
GCCCAGCCACCCTCTATCCTGAAGAAAACCTCGGCATATGGGCCTCCAACTCGAGCAGTTTCTATCCTTCCTCTCCTGGG
ACACGGTGTTCCACGTTTGCCCCCTGGCAGAAAACCGCCTGGCCCTCCACCTGGCCCACCTCCTCCTCAAGTTCTGCAGA
TGTATGGCCGTAAAGTGGGCTTTGCTCTCGATCTTCCCCCTCGGAGGCGAGATGAAGACATGCTGTACAGTCCGGAACTT
GCTCAGCGGGGCCATGATGATGACATGTCCAGCACCAGTGAGGACGACGGCTATCCTGAGGACATGGATCAGGATAAGCA
CGATGACAGTACTGAGGACAGTGACACTGACAGATCCGATGCAGAAAGTGATGGGGATGAGTTCGGCCACCGTGACGACA
GTGAGCGTGACAACACTGAGGAGAAGAAGTCAGGTCTGAGCGTCCGGTTTGCAGATATGCCTGGGAAATCTAGGAAGAAG
AAGAAGAACATGAAGGAGCTGACTCCTCTTCAAGCCATGATGCTGCGAATGGCAGGTCAGGAAATCCCTGAGGAAGGACG
GGAAGTGGAGGAGTTTTCAGAGGAGGAGGACGACGACGACTCTGAGGACTCTGAGGCAGAGAAGCCATCGCAGAAGCAGC
ATAAAGAGGATTCCCACGCTGACGGCTCCTCGGCCGCCTCTTCACAGCAGCAGGCCCCTCCACAGGCCGTTCCTCCTTCT
CAGATACAAGCACCTCCCATGCCAGGACCGCCACCTCTCGGACCACCGCCTGCCCCACCCTTACGGCCTCCTGGACCACC
TACAGGCCTTCCTCCTGGGCCACCTCCAGGGGCTCCTCCATTCCTGAGACCACCTGGGATGCCAGGAATCCGAGGGCCTT
TACCACGGCTTTTACCTCCAGGACCACCACCAGGCCGACCTCCTGGCCCTCCGCCAGGCCCACCTCCAGGTCTCCCCCCT
GGGCCCCCTCCTCGAGGACCCCCACCAAGGCTACCTCCTCCTGCACCTCCAGGTATCCCTCCTCCTCGTCCTGGCATGAT
GCGCCCTCCGTTGGTGCCTCCTCTTGGACCTGCCCCGCCTGGCCTTTTCCCGCCAGCTCCCTTACCCAACCCAGGGGTGT
TGAGTGCCCCACCCAGCCTCATTCAGCGACCGAAGGCGGATGATGCAAGTGCAGCCACCATCGAGAAGAAGGCCACAGCG
ACCATCAGTGCCAAGCCCCAGATCACCAATCCCAAGGCAGAGGTCACACGGTTTGTGCCCACTGCACTGAGGGTGCGCCG
CGAGAATAAGGGGGCTACTGCCGTTCCCCAAAGAAGGTCAGAGGAGGACTCTGCTGTGCCTGTGGCCAAAGCAGCCCCCA
GATCTGGGCCTTCAGTTCCTGTGTCGGTACAGACTAAGGACGATGTCTATGAAGCGTTTATGAAAGAGATGGAAGGGCTG
CTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 0 .00 RPM |
| SRP017611_kidney | 0 .07 RPM |
| SRP017611_brain | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000014759 | ortholog_many2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000012926 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000021611 | ortholog_many2many | 1 retrogene | |
| Homo sapiens | ENSG00000084463 | ortholog_one2many | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000004448 | ortholog_one2many | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000013971 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000015216 | ortholog_many2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000019299 | ortholog_many2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000017949 | ortholog_many2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000011619 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000030216 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003926 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000017177 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000010518 | ortholog_many2many | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000015008 | ortholog_one2many | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000004323 | ortholog_one2many | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000004724 | ortholog_one2many | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000049593 | within_species_paralog | 1 retrogene | |
| Sorex araneus | ENSSARG00000007085 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000016649 | ortholog_many2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000003394 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_741 | 70.25 | 55.69 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_1287 | 71.75 | 87.36 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_2726 | 62.64 | 81.28 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000005505 retrocopies