Parental gene: | Zcchc10, ENSRNOG00000006943 |
| Aliases: | None |
| Description: | Zinc finger CCHC domain-containing protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q5EB97] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 10:38445573..38455988(+) |
>ENSRNOG00000006943
ATGGCGACTCCCATGCATCGGCTTATAGCTCGGCGGCAAGCTGAAGCCAATAAGCAACACGTAAGATGTCAGAAATGCTT
GGAATTTGGACATTGGACTTATGAATGCAAAGGGAAAAGAAAGTACCTACATAGGCCTTCGAGAACAGCAGAGCTGAAGA
AAGCTTTAAAAGAAAAAGAAAATAGATTACTGCAGCAAAGCATGGGAGAGACCAACACGGAAAGAAAGACCAAGAAGAAG
AGGAGGCCTAAGAGTGTCACGAGTACCTCTAGCAGTGACAGTTCAGCCAGTGAGTCTTCATCAGAGAGCGAGACATCTGC
CTCGTCCTCTTCAGAGGACAGCGACGCAGATGGAAGCCTCTCCAGCTCCTCCTCCTCCTCAGCCTATTCCTCCTCCTCGT
CCTCCTCCTCCTCCTCGTCCTCCTCGTCCTCAGACTCAGACTCCAGCTCCTCCAGCAGCAGCAGCAGCAGTTCCGAGAGC
AGCTCTGACGACGAGCCACCAAAGAAGAGGAAAAAGAAATAG
ATGGCGACTCCCATGCATCGGCTTATAGCTCGGCGGCAAGCTGAAGCCAATAAGCAACACGTAAGATGTCAGAAATGCTT
GGAATTTGGACATTGGACTTATGAATGCAAAGGGAAAAGAAAGTACCTACATAGGCCTTCGAGAACAGCAGAGCTGAAGA
AAGCTTTAAAAGAAAAAGAAAATAGATTACTGCAGCAAAGCATGGGAGAGACCAACACGGAAAGAAAGACCAAGAAGAAG
AGGAGGCCTAAGAGTGTCACGAGTACCTCTAGCAGTGACAGTTCAGCCAGTGAGTCTTCATCAGAGAGCGAGACATCTGC
CTCGTCCTCTTCAGAGGACAGCGACGCAGATGGAAGCCTCTCCAGCTCCTCCTCCTCCTCAGCCTATTCCTCCTCCTCGT
CCTCCTCCTCCTCCTCGTCCTCCTCGTCCTCAGACTCAGACTCCAGCTCCTCCAGCAGCAGCAGCAGCAGTTCCGAGAGC
AGCTCTGACGACGAGCCACCAAAGAAGAGGAAAAAGAAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 0 .74 RPM |
| SRP017611_kidney | 5 .09 RPM |
| SRP017611_brain | 4 .24 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000031203 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000001420 | ortholog_one2one | 9 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000017302 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000011366 | ortholog_one2many | 4 retrogenes | |
| Monodelphis domestica | ENSMODG00000013827 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000018239 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000032171 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000015776 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000007221 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_801 | 87.60 | 68.21 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_2037 | 77.50 | 68.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_2528 | 73.39 | 62.43 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000006943 retrocopies