Parental gene: | Nudc, ENSRNOG00000007399 |
| Aliases: | Nudc, Silg92, c15 |
| Description: | Nuclear migration protein nudC [Source:UniProtKB/Swiss-Prot;Acc:Q63525] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 5:155443981..155457375(-) |
>ENSRNOG00000007399
ATGGGAGGGGAGCAGGAGGAGGAGCGCTTCGACGGCATGCTGCTGGCCATGGCGCAGCAGCACGAGGGCGGCGTGCAGGA
GCTTGTGAACACCTTCTTCAGCTTCCTTCGACGCAAAACAGACTTTTTCATTGGAGGAGAAGAGGGGATGGCAGAGAAGC
TCATCACACAGACTTTTAACCACCACAACCAGCTGGCACAGAAGGCCAGGAGAGAGAAGCGAGCTCGGCAGGAGACAGAG
CGTCGGGAGAAGGCAGAGCGGGCAGCCAGGCTGGCCAAGGAGGCCAAGGCAGAGACTCCCGGGCCACAGATCAAGGAACT
GACTGATGAGGAGGCAGAGAGACTGCAGCTGGAGATTGACCAGAAAAAGGATGCAGAGAACCATGAGGTGCAGCTTAAGA
ACGGCAGTCTTGACTCTCCAGGGAAGCAGGATGCTGAGGAAGAGGAAGACGAGGAAGACGAGAAGGACAAAGGAAAGCTG
AAACCCAACCTAGGCAATGGGGCTGACCTGCCCAACTACCGCTGGACCCAGACCCTGTCAGAGCTGGATCTGGCAGTGCC
CTTCCGAGTCAGCTTCCGGCTGAAGGGAAAGGATGTGGTGGTGGACATCCAGCGGCGGCACCTCCGGGTGGGCCTCAAAG
GACAGGCACCAGTGATTGATGGAGAGCTCTACAATGAAGTAAAGGTGGAGGAGAGCTCGTGGCTCATCGAGGATGGCAAG
GTGGTGACAGTGCATCTGGAGAAGATCAATAAGATGGAGTGGTGGAACCGCTTGGTTACCAGTGACCCCGAAATCAATAC
CAAGAAGATTAACCCTGAGAACTCCAAGCTCTCAGACCTGGACAGTGAGACTCGCAGCATGGTGGAAAAAATGATGTATG
ACCAGAGGCAGAAGTCCATGGGCTTGCCCACCTCTGATGAGCAGAAGAAACAGGAAATCCTGAAGAAGTTCATGGATCAG
CACCCAGAGATGGATTTCTCCAAGGCCAAATTCAACTAG
ATGGGAGGGGAGCAGGAGGAGGAGCGCTTCGACGGCATGCTGCTGGCCATGGCGCAGCAGCACGAGGGCGGCGTGCAGGA
GCTTGTGAACACCTTCTTCAGCTTCCTTCGACGCAAAACAGACTTTTTCATTGGAGGAGAAGAGGGGATGGCAGAGAAGC
TCATCACACAGACTTTTAACCACCACAACCAGCTGGCACAGAAGGCCAGGAGAGAGAAGCGAGCTCGGCAGGAGACAGAG
CGTCGGGAGAAGGCAGAGCGGGCAGCCAGGCTGGCCAAGGAGGCCAAGGCAGAGACTCCCGGGCCACAGATCAAGGAACT
GACTGATGAGGAGGCAGAGAGACTGCAGCTGGAGATTGACCAGAAAAAGGATGCAGAGAACCATGAGGTGCAGCTTAAGA
ACGGCAGTCTTGACTCTCCAGGGAAGCAGGATGCTGAGGAAGAGGAAGACGAGGAAGACGAGAAGGACAAAGGAAAGCTG
AAACCCAACCTAGGCAATGGGGCTGACCTGCCCAACTACCGCTGGACCCAGACCCTGTCAGAGCTGGATCTGGCAGTGCC
CTTCCGAGTCAGCTTCCGGCTGAAGGGAAAGGATGTGGTGGTGGACATCCAGCGGCGGCACCTCCGGGTGGGCCTCAAAG
GACAGGCACCAGTGATTGATGGAGAGCTCTACAATGAAGTAAAGGTGGAGGAGAGCTCGTGGCTCATCGAGGATGGCAAG
GTGGTGACAGTGCATCTGGAGAAGATCAATAAGATGGAGTGGTGGAACCGCTTGGTTACCAGTGACCCCGAAATCAATAC
CAAGAAGATTAACCCTGAGAACTCCAAGCTCTCAGACCTGGACAGTGAGACTCGCAGCATGGTGGAAAAAATGATGTATG
ACCAGAGGCAGAAGTCCATGGGCTTGCCCACCTCTGATGAGCAGAAGAAACAGGAAATCCTGAAGAAGTTCATGGATCAG
CACCCAGAGATGGATTTCTCCAAGGCCAAATTCAACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 3 .03 RPM |
| SRP017611_kidney | 4 .75 RPM |
| SRP017611_brain | 7 .48 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Erinaceus europaeus | ENSEEUG00000001291 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000090273 | ortholog_one2many | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000015314 | ortholog_one2many | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000015671 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000028851 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000009404 | ortholog_one2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000001673 | ortholog_one2many | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000000395 | ortholog_one2many | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000004408 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_2009 | 90.23 | 79.82 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_2108 | 90.69 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000007399 retrocopies