Parental gene:

Nop16, ENSRNOG00000017284

Aliases:Nop16, RGD1305727
Description:Nucleolar protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q1RP77]
Organism:Rat (Rattus norvegicus)
Coordinates:17:12685784..12690719(+)


>ENSRNOG00000017284
ATGCCCAAGGCTAAGGGAAAGACTCGGAGGCAGAAGTTCGGTTACAACGTCAACCGAAAGCGTCTGAACCGGAATGCTCG
TCGGAAGGCAGCGCCACGGATCGAGTGCTCCCACATCCGACATGCCTGGGACCACACCAAATCCGTGCGGCAGAACCTGG
CGGAGATGGGGTTGGCCATGGACCCCAACAAGGCGGTTCCCCTCCGTAAGAGGAAGGTAAAGGCCATGGAGGTAGACACG
GAGGAGAGACCCAAGGATCTTGTTCGGAAGCCCTATGTGGTTAATGACCTGGAGGCAGAAGCTAGCCTCCCAGAGAAGAA
AGGAAATACCTTGTCTCGGGACCTCATCGATTATGTTCATTACATGGTGGAGAATCATGGAGAGGACTATAAGGCCATGG
CCCGGGATGAGAAGAATTACTATCAAGACACCCCAAAACAGATCCGGAATAAGATCAATGTCTATAAGCGCTTTTACCCA
ACGGAGTGGCAAGTCTTTGTGGCTTCTTTGCAGAATAAGAAGATGGAGGTAGACTGA

Library Parental gene expression (RPM)
SRP017611_liver 10 .62 RPM
SRP017611_kidney 17 .38 RPM
SRP017611_brain 22 .72 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000016694 possible_ortholog 2 retrogenes
retro_cfam_1790, retro_cfam_1793,
Callithrix jacchus ENSCJAG00000012315 ortholog_many2many 1 retrogene
retro_cjac_2208,
Cavia porcellus ENSCPOG00000026072 ortholog_one2many 1 retrogene
retro_cpor_129,
Echinops telfairi ENSETEG00000010391 ortholog_many2many 1 retrogene
retro_etel_1329,
Myotis lucifugus ENSMLUG00000003504 ortholog_one2many 1 retrogene
retro_mluc_2425,
Mustela putorius furo ENSMPUG00000012552 possible_ortholog 1 retrogene
retro_mputfur_381,
Mus musculus ENSMUSG00000025869 ortholog_one2many 2 retrogenes
retro_mmus_3033, retro_mmus_3258,
Otolemur garnettii ENSOGAG00000000824 possible_ortholog 2 retrogenes
retro_ogar_1323, retro_ogar_2299,
Sus scrofa ENSSSCG00000029577 ortholog_one2many 1 retrogene
retro_sscr_510,
Ictidomys tridecemlineatus ENSSTOG00000004869 possible_ortholog 1 retrogene
retro_itri_1124,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2739 83.33 58.99
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Download FASTA sequences of all ENSRNOG00000017284 retrocopies