Parental gene: | Tubg1, ENSRNOG00000020213 |
| Aliases: | None |
| Description: | Tubulin gamma-1 chain [Source:UniProtKB/Swiss-Prot;Acc:P83888] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 10:88829360..88835951(+) |
>ENSRNOG00000020213
ATGCCGAGAGAAATCATCACCCTACAGTTGGGCCAGTGCGGCAATCAGATTGGGTTCGAGTTCTGGAAACAGCTATGTGC
TGAGCATGGCATCAGCCCCGAGGGCATCGTAGAGGAGTTCGCCACCGAGGGCACTGACCGCAAGGACGTCTTTTTCTACC
AGGCAGACGATGAGCATTACATCCCCCGGGCTGTGCTGCTGGACCTGGAGCCCCGGGTGATCCATTCCATCCTCAACTCC
TCCTATGCCAAGCTCTACAACCCAGAGAACATCTACCTGTCCGAGCATGGAGGAGGGGCTGGCAACAACTGGGCCAGCGG
ATTCTCCCAGGGAGAAAAAATCCACGAGGACATTTTTGACATCATTGATCGGGAGGCAGATGGCAGTGACAGCCTAGAGG
GATTTGTACTGTGTCACTCCATTGCTGGGGGGACAGGCTCTGGCTTGGGCTCCTACCTCTTGGAACGGCTAAATGACAGG
TACCCCAAAAAACTAGTGCAGACGTACTCCGTGTTCCCCAACCAGGACGAGATGAGTGACGTGGTGGTCCAGCCCTACAA
CTCCCTCCTCACGTTAAAGAGGCTGACCCAGAACGCGGACTGTGTGGTGGTGCTGGACAACACGGCCCTGAACCTGATCG
CCACAGACCGCCTGCACATCCAGAACCCATCCTTCTCCCAGATCAACCAGCTGGTGTCCACCATCATGTCAGCCAGCACC
ACCACCCTGCGCTACCCCGGATACATGAACAACGACCTCATCGGCCTCATCGCCTCACTCATTCCCACCCCTCGACTACA
CTTCCTCATGACTGGCTATACCCCCCTCACCACGGACCAGTCAGTGGCCAGTGTGAGGAAGACAACAGTCCTGGATGTCA
TGAGGAGACTGCTACAGCCCAAGAACGTGATGGTGTCCACAGGTCGGGATCGTCAGACCAACCACTGCTACATCGCCATC
CTCAACATCATCCAGGGAGAGGTGGACCCCACCCAGGTCCACAAGAGCCTGCAGAGGATCCGGGAGAGGAAGTTGGCCAA
CTTTATCCCCTGGGGCCCGGCCAGCATCCAGGTGGCCCTGTCAAGGAAGTCTCCCTACCTGCCCTCAGCCCACCGGGTCA
GCGGGCTCATGATGGCCAACCACACCAGTATCTCCTCGCTTTTTGAAAGGACCTGTCGCCAGTTTGACAAGCTGAGGAAA
CGGGAGGCCTTCATGGAGCAGTTCCGCAAGGAGGACATCTTCAAGGACAATTTTGACGAGATGGACACCTCCAGGGAGAT
TGTGCAGCAGCTGATTGACGAGTACCATGCGGCCACACGGCCAGACTACATCTCCTGGGGCACCCAGGAGCAATGA
ATGCCGAGAGAAATCATCACCCTACAGTTGGGCCAGTGCGGCAATCAGATTGGGTTCGAGTTCTGGAAACAGCTATGTGC
TGAGCATGGCATCAGCCCCGAGGGCATCGTAGAGGAGTTCGCCACCGAGGGCACTGACCGCAAGGACGTCTTTTTCTACC
AGGCAGACGATGAGCATTACATCCCCCGGGCTGTGCTGCTGGACCTGGAGCCCCGGGTGATCCATTCCATCCTCAACTCC
TCCTATGCCAAGCTCTACAACCCAGAGAACATCTACCTGTCCGAGCATGGAGGAGGGGCTGGCAACAACTGGGCCAGCGG
ATTCTCCCAGGGAGAAAAAATCCACGAGGACATTTTTGACATCATTGATCGGGAGGCAGATGGCAGTGACAGCCTAGAGG
GATTTGTACTGTGTCACTCCATTGCTGGGGGGACAGGCTCTGGCTTGGGCTCCTACCTCTTGGAACGGCTAAATGACAGG
TACCCCAAAAAACTAGTGCAGACGTACTCCGTGTTCCCCAACCAGGACGAGATGAGTGACGTGGTGGTCCAGCCCTACAA
CTCCCTCCTCACGTTAAAGAGGCTGACCCAGAACGCGGACTGTGTGGTGGTGCTGGACAACACGGCCCTGAACCTGATCG
CCACAGACCGCCTGCACATCCAGAACCCATCCTTCTCCCAGATCAACCAGCTGGTGTCCACCATCATGTCAGCCAGCACC
ACCACCCTGCGCTACCCCGGATACATGAACAACGACCTCATCGGCCTCATCGCCTCACTCATTCCCACCCCTCGACTACA
CTTCCTCATGACTGGCTATACCCCCCTCACCACGGACCAGTCAGTGGCCAGTGTGAGGAAGACAACAGTCCTGGATGTCA
TGAGGAGACTGCTACAGCCCAAGAACGTGATGGTGTCCACAGGTCGGGATCGTCAGACCAACCACTGCTACATCGCCATC
CTCAACATCATCCAGGGAGAGGTGGACCCCACCCAGGTCCACAAGAGCCTGCAGAGGATCCGGGAGAGGAAGTTGGCCAA
CTTTATCCCCTGGGGCCCGGCCAGCATCCAGGTGGCCCTGTCAAGGAAGTCTCCCTACCTGCCCTCAGCCCACCGGGTCA
GCGGGCTCATGATGGCCAACCACACCAGTATCTCCTCGCTTTTTGAAAGGACCTGTCGCCAGTTTGACAAGCTGAGGAAA
CGGGAGGCCTTCATGGAGCAGTTCCGCAAGGAGGACATCTTCAAGGACAATTTTGACGAGATGGACACCTCCAGGGAGAT
TGTGCAGCAGCTGATTGACGAGTACCATGCGGCCACACGGCCAGACTACATCTCCTGGGGCACCCAGGAGCAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 12 .64 RPM |
| SRP017611_kidney | 23 .10 RPM |
| SRP017611_brain | 27 .97 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000004907 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000008542 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000131462 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000010899 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000016797 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011686 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000008384 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000009211 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000015835 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_2070 | 71.94 | 55.88 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_2072 | 71.94 | 55.88 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000020213 retrocopies