Parental gene: | PBDC1, ENSTBEG00000003411 |
| Aliases: | None |
| Description: | polysaccharide biosynthesis domain containing 1 [Source:HGNC Symbol;Acc:28790] |
| Organism: | Treeshrew (Tupaia belangeri) |
| Coordinates: | GeneScaffold_935:226015..232013(-) |
>ENSTBEG00000003411
ATGGAGGCTTCTAGTGGAACTGATGAGGTTTCCGGGGAGCTGCTATCTGTGGCACATGCTCTTTCGCTCCCAGCAGAATC
ATATGGAAATGATCCTGACATTGAGATGGCTTGGGCCATGAGAGCAATGCAGCATGCTGAAGTCTATTACAAGCTGATTT
CATCAGTTGACCCACAGTTCCTGAAACTCACCAAAGTGGATGACCAAATTTACTCTGAGTTCCGGGAAATTTTTGAGAAA
CTCAGGATAGATGTATTGGACCCAGAAGAACTCAAATCAGAATCAGCTAAAGAGAAGTGGAGGCCATTCTGCATGAAGTT
TGATGGGATCGTAGAAGACTTCAACTATGGTACTTTGTTACGACTAGATTCTCAGTACACTGAGGAAACCATCGCCCCCA
GGATTCAATTTTTTGCCATTGAAATTGCTCGGAACCGGGAAGGCTATAATAAAGCAGTTTATATCAGTGTTCAGGACAGA
GAAAGAGAGAAAGAAGCCAACAATGGTGGAGAGGAAGGAGCTGACAGTAGAGAAGAAAAGGCCAAGAAAGGAGAAGAGAA
AGAAGTTGATAGAGAAGAAAAGAAGAAAACTGTCAAAGGAGGAGAAAAAGAGAAAGAAGCCAATAAAATGATTAAAGGTG
AAACACCTATGTAA
ATGGAGGCTTCTAGTGGAACTGATGAGGTTTCCGGGGAGCTGCTATCTGTGGCACATGCTCTTTCGCTCCCAGCAGAATC
ATATGGAAATGATCCTGACATTGAGATGGCTTGGGCCATGAGAGCAATGCAGCATGCTGAAGTCTATTACAAGCTGATTT
CATCAGTTGACCCACAGTTCCTGAAACTCACCAAAGTGGATGACCAAATTTACTCTGAGTTCCGGGAAATTTTTGAGAAA
CTCAGGATAGATGTATTGGACCCAGAAGAACTCAAATCAGAATCAGCTAAAGAGAAGTGGAGGCCATTCTGCATGAAGTT
TGATGGGATCGTAGAAGACTTCAACTATGGTACTTTGTTACGACTAGATTCTCAGTACACTGAGGAAACCATCGCCCCCA
GGATTCAATTTTTTGCCATTGAAATTGCTCGGAACCGGGAAGGCTATAATAAAGCAGTTTATATCAGTGTTCAGGACAGA
GAAAGAGAGAAAGAAGCCAACAATGGTGGAGAGGAAGGAGCTGACAGTAGAGAAGAAAAGGCCAAGAAAGGAGAAGAGAA
AGAAGTTGATAGAGAAGAAAAGAAGAAAACTGTCAAAGGAGGAGAAAAAGAGAAAGAAGCCAATAAAATGATTAAAGGTG
AAACACCTATGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000017228 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000018571 | ortholog_one2many | 1 retrogene | |
| Equus caballus | ENSECAG00000009882 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000001116 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000009685 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000031226 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000001088 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000015205 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000002662 | ortholog_one2one | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000017872 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tbel_494 | 86.26 | 58.99 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tbel_979 | 69.51 | 72.81 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tbel_3448 | 66.26 | 72.35 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTBEG00000003411 retrocopies