Parental gene: | KRR1, ENSTBEG00000008145 |
| Aliases: | None |
| Description: | KRR1, small subunit (SSU) processome component, homolog (yeast) [Source:HGNC Symbol;Acc:5176] |
| Organism: | Treeshrew (Tupaia belangeri) |
| Coordinates: | GeneScaffold_2721:61898..76954(-) |
>ENSTBEG00000008145
ATGGCGGCTTCCTCGCTGAACGGGCCGGCTGCCGGGACTGGGAAAAGTGAATTTCGGAATCAGAAGTCAAAGGTAGAGAA
CCGAGATGAATCAGAGCTACTTACTGTTCCTGATGGTTGGAAGGAACCAGCCTTTTCCAAAGAAGACAATCCCAGAGGAC
TCTTGGAGGAGAGCAGTTTTGCAACCTTGTTTCCAAAGTATAGAGAGGCTTACTTGAAAGAGTGTTGGCCTTTGGTGCAG
AAAGCATTGAATGAACATCACGTTAAAGCAACCTTGGACCTGATCGAGGGCAGCATGACTGTTTGTACTACGAAGAAGAC
TTTTGATCCGTACATCATCATTAGGGCCAGAGACTTAATAAAACTGTTAGCAAGGAGTGTTTCATTTGAGCAGGCAGTAC
GAATTCTTCAGGATGACATTGCATGTGACATCATCAAAATAGGTTCTTTGGTAAGAAATAAAGAACGATTTGTAAAAAGA
AGACAACGGCTTATTGGTCCCAAAGGATCTACATTGAAGGCATTGGAACTCTTAACAAACTGTTACATTATGGTTCAAGG
AAACACAGTTTCAGCCATCGGACCTTTTAATGGATTAAAGGAGGTTCGAAAAGTAGTCCTAGATACTATGAAGAATATTC
ATCCAATTTATAACATTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTAAACAAGCAGAAGCTCTCAGTAGACAAGAGGAAAGAAACAAAGCTTTT
ATTCCACCTAAAGAAAAATCAGTAGTGAACCCTAAGGAA
ATGGCGGCTTCCTCGCTGAACGGGCCGGCTGCCGGGACTGGGAAAAGTGAATTTCGGAATCAGAAGTCAAAGGTAGAGAA
CCGAGATGAATCAGAGCTACTTACTGTTCCTGATGGTTGGAAGGAACCAGCCTTTTCCAAAGAAGACAATCCCAGAGGAC
TCTTGGAGGAGAGCAGTTTTGCAACCTTGTTTCCAAAGTATAGAGAGGCTTACTTGAAAGAGTGTTGGCCTTTGGTGCAG
AAAGCATTGAATGAACATCACGTTAAAGCAACCTTGGACCTGATCGAGGGCAGCATGACTGTTTGTACTACGAAGAAGAC
TTTTGATCCGTACATCATCATTAGGGCCAGAGACTTAATAAAACTGTTAGCAAGGAGTGTTTCATTTGAGCAGGCAGTAC
GAATTCTTCAGGATGACATTGCATGTGACATCATCAAAATAGGTTCTTTGGTAAGAAATAAAGAACGATTTGTAAAAAGA
AGACAACGGCTTATTGGTCCCAAAGGATCTACATTGAAGGCATTGGAACTCTTAACAAACTGTTACATTATGGTTCAAGG
AAACACAGTTTCAGCCATCGGACCTTTTAATGGATTAAAGGAGGTTCGAAAAGTAGTCCTAGATACTATGAAGAATATTC
ATCCAATTTATAACATTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTAAACAAGCAGAAGCTCTCAGTAGACAAGAGGAAAGAAACAAAGCTTTT
ATTCCACCTAAAGAAAAATCAGTAGTGAACCCTAAGGAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000006437 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000005665 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000009636 | ortholog_one2one | 5 retrogenes | |
| Monodelphis domestica | ENSMODG00000020451 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tbel_1056 | 83.86 | 66.07 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tbel_2060 | 79.03 | 54.65 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tbel_2911 | 80.63 | 66.07 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_tbel_2915 | 86.04 | 66.07 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_tbel_3679 | 88.69 | 66.07 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTBEG00000008145 retrocopies