Parental gene: | LDHC, ENSTBEG00000011741 |
| Aliases: | None |
| Description: | lactate dehydrogenase C [Source:HGNC Symbol;Acc:6544] |
| Organism: | Treeshrew (Tupaia belangeri) |
| Coordinates: | GeneScaffold_1322:133943..141017(+) |
>ENSTBEG00000011741
ATGTCAAGTGTCAAGGAGCAGCTTATTGAGAATCTAACCGAGGAAGATAAGGTGTCCCACTCTAAGATCACCATTGTCGG
AGCTGGCGCCGTTGGCATGGCCTGTGCTATCAGCATCTTACTGAAGGATTTGGCTGATGAACTTGCCCTCGTTGATGTCG
CCACAGACAAATTGAAGGGGGAAATGATGGATCTTCAGCATGGCAGTCTGTTCTTTAGTACTTCAAAGATTACCTCTGGA
AAAGATTACAGCATATCTGCAAATTCTAAATTAGTTATTGTCACAGCCGGGGCAAGGCAGCAGGAAGGAGAAAGTCGCCT
TGCCCTGGTCCAGCGTAATGTGAATATCATGAAATCAATCATTCCTACCATAGTTCATTACAGTCCTGAATGTAAAATGC
TTATTGTTTCAAATCCAGTGGATATTTTGACATATGTGGTCTGGAAGTTAAGTGGCCTACCTGTGACTCGAGTAATTGGA
AGTGGTTGTAATCTCGATTCTGCCCGTTTTCGTTATCTAATTGGAGAGAAGTTGGGTGTTCATGCCACAAGCTGTCATGG
TTGGATTATTGGAGAACATGGGGATTCTAGT
ATGTCAAGTGTCAAGGAGCAGCTTATTGAGAATCTAACCGAGGAAGATAAGGTGTCCCACTCTAAGATCACCATTGTCGG
AGCTGGCGCCGTTGGCATGGCCTGTGCTATCAGCATCTTACTGAAGGATTTGGCTGATGAACTTGCCCTCGTTGATGTCG
CCACAGACAAATTGAAGGGGGAAATGATGGATCTTCAGCATGGCAGTCTGTTCTTTAGTACTTCAAAGATTACCTCTGGA
AAAGATTACAGCATATCTGCAAATTCTAAATTAGTTATTGTCACAGCCGGGGCAAGGCAGCAGGAAGGAGAAAGTCGCCT
TGCCCTGGTCCAGCGTAATGTGAATATCATGAAATCAATCATTCCTACCATAGTTCATTACAGTCCTGAATGTAAAATGC
TTATTGTTTCAAATCCAGTGGATATTTTGACATATGTGGTCTGGAAGTTAAGTGGCCTACCTGTGACTCGAGTAATTGGA
AGTGGTTGTAATCTCGATTCTGCCCGTTTTCGTTATCTAATTGGAGAGAAGTTGGGTGTTCATGCCACAAGCTGTCATGG
TTGGATTATTGGAGAACATGGGGATTCTAGT
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Rattus norvegicus | ENSRNOG00000013103 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000008062 | possible_ortholog | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tbel_499 | 70.56 | 99.49 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tbel_676 | 70.85 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tbel_1130 | 65.22 | 81.22 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_tbel_1300 | 52.34 | 53.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_tbel_1344 | 52.25 | 56.35 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_tbel_1657 | 64.29 | 98.98 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_tbel_2072 | 70.35 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_tbel_2125 | 69.41 | 85.28 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_tbel_2227 | 65.15 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_tbel_2254 | 60.91 | 98.98 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_tbel_2367 | 66.83 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_tbel_2433 | 66.67 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_tbel_2640 | 67.51 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_tbel_2775 | 57.72 | 62.44 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_tbel_2859 | 64.18 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_tbel_2877 | 56.31 | 51.27 | Please wait, loading | Please wait, loading | Please wait, loading |
| 17. | retro_tbel_2960 | 69.19 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 18. | retro_tbel_3042 | 72.59 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 19. | retro_tbel_3188 | 62.57 | 94.42 | Please wait, loading | Please wait, loading | Please wait, loading |
| 20. | retro_tbel_3468 | 62.63 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 21. | retro_tbel_3683 | 59.26 | 65.48 | Please wait, loading | Please wait, loading | Please wait, loading |
| 22. | retro_tbel_4189 | 63.16 | 76.65 | Please wait, loading | Please wait, loading | Please wait, loading |
| 23. | retro_tbel_4323 | 66.91 | 68.02 | Please wait, loading | Please wait, loading | Please wait, loading |
| 24. | retro_tbel_4557 | 53.40 | 51.78 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTBEG00000011741 retrocopies