Parental gene: | SMG5, ENSTTRG00000001401 |
| Aliases: | None |
| Description: | SMG5 nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:24644] |
| Organism: | Dolphin (Tursiops truncatus) |
| Coordinates: | GeneScaffold_2209:116568..143132(-) |
>ENSTTRG00000001401
ATGAGCCAAGGCCCCCCCACAGGGGAGAGCAGCGAGCCCGAAGCAAAGGTCCTCCACACTAAGCGGCTTTACCGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGCTGCGTGAGCTCTGCGTCAAGCTTATGTTCCTGCACCCGATGGACTATGGGAGGAAGGCAGAGGAG
CTGCTGTGGAGAAAGGTGTACTACGAAGTTATCCAGCTTATCAAGACTAACAAAAAGCATATCCACAGCCGGAGCACCTT
GGAATGTGCCTACAGGACACACCTGGTCGCTGGTATCGGCTTCTACCAGCATCTCCTTCTTTATATCCAGTCCCACTACC
AGCTAGAACTGCAGTGCTGCATCGACTGGACCCATGTCACCGACCCCCTCATAGGATGCAAGAAGCCAGTGTCTGCCTCA
GGGAAGGAGATGGATTGGGCACAGATGGCATGCCACCGATGTCTAGTGTACCTGGGGGATTTGTCACGATATCAGAATGA
ATTAGCTGGCGTAGACACTGAGCTGCTAGCTGAGAGATTTTACTACCAAGCCCTGTCAGTGGCTCCCCAGATTGGAATGC
CCTTCAACCAGCTGGGCACACTTGCCGGCAGCAAGTACTATAATGTGGAAGCCATGTATTGCTACCTGCGCTGCATCCAG
TCGGAAGTGTCCTTTGAGGGGGCCTATGGGAACCTCAAGCGGCTGTATGACAAGGCAGCCAAAATGTACCACCAGCTGAA
GAAGTGCGAGACTCGGAAGCTCTCTCCCAGCAAGAAGCGATGTAAAGACATTAAGAGGTTGCTGGTGAACTTTATGTATC
TGCAAAGCCTCCTGCAGCCCAAAAGCAGCTCTGTGGACTCAGAGCTGACATCACTTTGCCAGTCAGTCCTGGAGGACTTC
AACCTCTGTCTCTTCTACCTGCCCTCCTCACCCAACCTCAGCCTGGCCAGTGAGGATGAGGAGGAGTATGAGAGTGGATA
TGCTTTCCTCCCGGACCTTCTCATCTTTCAGATGGTCATCATCTGCCTTATGGGTGTGCACAGCTTGAAGAGAGCAGGAT
CCAAGCAGTACAGTGCAGCCATTGCCTTCACCCTGGCCCTCTTCTCCCACCTTGTCAATCATGTCAACATACGGCTGCAA
GCTGAGCTGGAAGAGGGCGAGAATCCCGTCCCGGCATTCCAGAGTGATGGCACAGATGAAGCAGAGTCCAAGGAACCCTT
GGAGAAGGTGGAGGAGCCGGGTCCTGAGCCTCCTCCTGCAGCATCTCAAGATGGCGAGGTCAGAAAGAGCCGGAAGTTCT
CCCGCCTCTCCTGCCTCCGCCGCCGGCGCCACCCACCCAAAGCTGGTGATGACAGTGACCTGAGTGAAGGCTTTGACTCA
GACTCGAGCCATGACTCAGCCCGGGCCAGTGAGGGCTCAGACAGTGGCTCCGACAAGAGCCTTGAAGGTGGGGGAACAGC
CTTTGATGCCGAGACAGATTCAGAAATGAACAGCCAAGAGTCCCGATCAGACCTGGAAGATATGGAGGACGAGGAAGGGA
CACGGTCCCCAGCCCTGGAGCCACCTCGGGCCAGGTCAGAGGCTCCTGAATCCCTCAATGGCCCACTGGGCCCCAGTGAG
GCCAGCATTGCCAGCAATCTACAAGCCATGTCCACCCAGATGTTCCAGACTAAACGCTGCTTCCGACTGGCCCCCACCTT
CAGCAACCTGCTCCTCCAGCCCACCACCGAAGCTCCCACCTTGGCCAGCCGCAGGCCCTGTGTCAATGGGGATGTGGACA
AGCCCTCAGAGCCAGCCTCTGAAGAGGGCTCTGAGTCGGAGGGAAGTGAGTCTAGTGGGCGCTCCTGTCGGAATGAGCGC
AGCATCCAGGAGAAGCTGCAAGTCCTGATGGCGGAAGGCCTGCTTCCTGCTGTGAAAGTCTTCCTGGACTGGCTACGGAC
TAACCCCGACCTCATCATAGTGTGTGCGCAGAGCTCTCAAAGTCTGTGGAACCGCCTCTCTGTGTTGCTTAATCTGTTGC
CAGCTGCTGGCGAACTCCAAGAGTCTGGCCTGGTCCTGTGTCCTGAGGTCCAGGATCTTCTTGAAGGTTGTGAACTGCCT
GACCTCCCGTCTAGCTTGCTGCTCCCAGAGGACATGGCCCTTCGCAACCTGCCTCCCCTCCGGGCTGCCCACAGACGCTT
TAACTTCGACACGGATCGGCTCTTGCTCAGCACCTCAGAGGAGACGGTCGTGCGCATCTGCTGCATCCGCAGCTTTGGCC
ACTTCGTTGCCCGCCTGCAAGGCAGCATCCTGCAGTTCAACCCAGAGGTTGGCATCTTCGTCAGCATCGCCCAGTCTGAG
CAGGAGAGCCTGCTGCAGCAGGCCCAGGCCCAGTTCCGCATGGCACAGGAGGAAGCTCGGCGGAACAGGCTAATGAGAGA
CATGGCCCAGCTACGACTTCAGCTCGAGGTCTCTCAGCTGGAAAGCCTGCAGCAGCCCAAGGCCCAGTCAGCAATGTCTC
CCTACCTCGTCCCCGACACCCAAGCCTGCCACCACCTCCCTGTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTGATCGATGGCCTGGATTTGCTGAAGAAGGAACACCCCGGGGCCCGGGATGGGATCCGATACCT
GGAGGCAGAGTTTAAAAAAGGGAACAGGTACATTCGCTGCCAGAAAGAGGTGGGGAAGAGCTTTGAGCGGCATAAGCTGA
AGAGGCAGGATGCAGATGCCTGGACGCTCTATAAGATCCTGGACAGCTGCAAACAGCTGACTCTGGCCCAGGGGGCAGGT
GAGGAGGACCCGAGTGGCATGGTGACCATCATCACAGGCCTTCCACTGGACAACCCCAGCACGCTCTCAGGCCCTATGCA
GGCAGCCTTGCAGGCCGCTGCACATGCCAGTGTGGACATCAAGAATGTTCTGGACTTCTACAAGCAGTGGAAGGAGATTG
GTTGA
ATGAGCCAAGGCCCCCCCACAGGGGAGAGCAGCGAGCCCGAAGCAAAGGTCCTCCACACTAAGCGGCTTTACCGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGCTGCGTGAGCTCTGCGTCAAGCTTATGTTCCTGCACCCGATGGACTATGGGAGGAAGGCAGAGGAG
CTGCTGTGGAGAAAGGTGTACTACGAAGTTATCCAGCTTATCAAGACTAACAAAAAGCATATCCACAGCCGGAGCACCTT
GGAATGTGCCTACAGGACACACCTGGTCGCTGGTATCGGCTTCTACCAGCATCTCCTTCTTTATATCCAGTCCCACTACC
AGCTAGAACTGCAGTGCTGCATCGACTGGACCCATGTCACCGACCCCCTCATAGGATGCAAGAAGCCAGTGTCTGCCTCA
GGGAAGGAGATGGATTGGGCACAGATGGCATGCCACCGATGTCTAGTGTACCTGGGGGATTTGTCACGATATCAGAATGA
ATTAGCTGGCGTAGACACTGAGCTGCTAGCTGAGAGATTTTACTACCAAGCCCTGTCAGTGGCTCCCCAGATTGGAATGC
CCTTCAACCAGCTGGGCACACTTGCCGGCAGCAAGTACTATAATGTGGAAGCCATGTATTGCTACCTGCGCTGCATCCAG
TCGGAAGTGTCCTTTGAGGGGGCCTATGGGAACCTCAAGCGGCTGTATGACAAGGCAGCCAAAATGTACCACCAGCTGAA
GAAGTGCGAGACTCGGAAGCTCTCTCCCAGCAAGAAGCGATGTAAAGACATTAAGAGGTTGCTGGTGAACTTTATGTATC
TGCAAAGCCTCCTGCAGCCCAAAAGCAGCTCTGTGGACTCAGAGCTGACATCACTTTGCCAGTCAGTCCTGGAGGACTTC
AACCTCTGTCTCTTCTACCTGCCCTCCTCACCCAACCTCAGCCTGGCCAGTGAGGATGAGGAGGAGTATGAGAGTGGATA
TGCTTTCCTCCCGGACCTTCTCATCTTTCAGATGGTCATCATCTGCCTTATGGGTGTGCACAGCTTGAAGAGAGCAGGAT
CCAAGCAGTACAGTGCAGCCATTGCCTTCACCCTGGCCCTCTTCTCCCACCTTGTCAATCATGTCAACATACGGCTGCAA
GCTGAGCTGGAAGAGGGCGAGAATCCCGTCCCGGCATTCCAGAGTGATGGCACAGATGAAGCAGAGTCCAAGGAACCCTT
GGAGAAGGTGGAGGAGCCGGGTCCTGAGCCTCCTCCTGCAGCATCTCAAGATGGCGAGGTCAGAAAGAGCCGGAAGTTCT
CCCGCCTCTCCTGCCTCCGCCGCCGGCGCCACCCACCCAAAGCTGGTGATGACAGTGACCTGAGTGAAGGCTTTGACTCA
GACTCGAGCCATGACTCAGCCCGGGCCAGTGAGGGCTCAGACAGTGGCTCCGACAAGAGCCTTGAAGGTGGGGGAACAGC
CTTTGATGCCGAGACAGATTCAGAAATGAACAGCCAAGAGTCCCGATCAGACCTGGAAGATATGGAGGACGAGGAAGGGA
CACGGTCCCCAGCCCTGGAGCCACCTCGGGCCAGGTCAGAGGCTCCTGAATCCCTCAATGGCCCACTGGGCCCCAGTGAG
GCCAGCATTGCCAGCAATCTACAAGCCATGTCCACCCAGATGTTCCAGACTAAACGCTGCTTCCGACTGGCCCCCACCTT
CAGCAACCTGCTCCTCCAGCCCACCACCGAAGCTCCCACCTTGGCCAGCCGCAGGCCCTGTGTCAATGGGGATGTGGACA
AGCCCTCAGAGCCAGCCTCTGAAGAGGGCTCTGAGTCGGAGGGAAGTGAGTCTAGTGGGCGCTCCTGTCGGAATGAGCGC
AGCATCCAGGAGAAGCTGCAAGTCCTGATGGCGGAAGGCCTGCTTCCTGCTGTGAAAGTCTTCCTGGACTGGCTACGGAC
TAACCCCGACCTCATCATAGTGTGTGCGCAGAGCTCTCAAAGTCTGTGGAACCGCCTCTCTGTGTTGCTTAATCTGTTGC
CAGCTGCTGGCGAACTCCAAGAGTCTGGCCTGGTCCTGTGTCCTGAGGTCCAGGATCTTCTTGAAGGTTGTGAACTGCCT
GACCTCCCGTCTAGCTTGCTGCTCCCAGAGGACATGGCCCTTCGCAACCTGCCTCCCCTCCGGGCTGCCCACAGACGCTT
TAACTTCGACACGGATCGGCTCTTGCTCAGCACCTCAGAGGAGACGGTCGTGCGCATCTGCTGCATCCGCAGCTTTGGCC
ACTTCGTTGCCCGCCTGCAAGGCAGCATCCTGCAGTTCAACCCAGAGGTTGGCATCTTCGTCAGCATCGCCCAGTCTGAG
CAGGAGAGCCTGCTGCAGCAGGCCCAGGCCCAGTTCCGCATGGCACAGGAGGAAGCTCGGCGGAACAGGCTAATGAGAGA
CATGGCCCAGCTACGACTTCAGCTCGAGGTCTCTCAGCTGGAAAGCCTGCAGCAGCCCAAGGCCCAGTCAGCAATGTCTC
CCTACCTCGTCCCCGACACCCAAGCCTGCCACCACCTCCCTGTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTGATCGATGGCCTGGATTTGCTGAAGAAGGAACACCCCGGGGCCCGGGATGGGATCCGATACCT
GGAGGCAGAGTTTAAAAAAGGGAACAGGTACATTCGCTGCCAGAAAGAGGTGGGGAAGAGCTTTGAGCGGCATAAGCTGA
AGAGGCAGGATGCAGATGCCTGGACGCTCTATAAGATCCTGGACAGCTGCAAACAGCTGACTCTGGCCCAGGGGGCAGGT
GAGGAGGACCCGAGTGGCATGGTGACCATCATCACAGGCCTTCCACTGGACAACCCCAGCACGCTCTCAGGCCCTATGCA
GGCAGCCTTGCAGGCCGCTGCACATGCCAGTGTGGACATCAAGAATGTTCTGGACTTCTACAAGCAGTGGAAGGAGATTG
GTTGA
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ttru_1775 | 81.64 | 94.28 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTTRG00000001401 retrocopies