Parental gene: | ENSTTRG00000004689 |
| Aliases: | None |
| Description: | None |
| Organism: | Dolphin (Tursiops truncatus) |
| Coordinates: | scaffold_99408:245976..261271(-) |
>ENSTTRG00000004689
ATGAACCCCAGCGCCCCCAGCTACCCCATGGCCTCGCTCTACGTGGGGGACCTACACCCCGACGTGACCGAGGCGATGCT
CTATGAGAAGTTCAGTCCGGCCGGGCCCATCCTCTCCATCCGGGTCTGCAGGGACATGATCACCCGCCGCTCCTTGGGCT
ACGCGTATGTGAACTTCCAGCAGCCGGCAGACGCGGAGCGTGCTTTGGACACCATGAATTTTGATGTTATAAAGGGCAAG
CCAGTACGCATTATGTGGTCTCAGCGTGATCCATCACTTCGCAAAAGTGGAGTGGGCAACATATTCATTAAAAATTTGGA
CAAATCCATTGATAATAAAGCACTGTATGATACATTTTCTGCTTTTGGTAACATCCTTTCATGTAAGGTGGTTTGTGATG
AAAATGGTTCCAAGGGTTATGGATTTGTGCATTTTGAGACACAAGAAGCAGCTGAAAGAGCTATTGAAAAAATGAATGGG
ATGCTTCTAAATGATCGCAAAGTATTTGCTGGACGATTTAAGTCTCGTAAGGAACGAGAAGCAGAACTCGGAGCTAGGGC
AAAAGAGTTCACCAATGTTTACATCAAGAATTTTGGAGAAGACATGGATGATGAGCGCCTTAAGGATCTCTTTGGCAAGT
TTGGACCTGCCTTAAGTGTGAAAGTAATGACTGATGAGAGTGGAAAATCCAAAGGTTTTGGATTTGTAAGCTTTGAAAGG
CATGAAGATGCACAGAAAGCTGTGGATGAGATGAACGGAAAGGAGCTCAATGGAAAACAAATTTACGTTGGTCGAGCCCA
GAAAAAAGTGGAAAGACAGACGGAACTTAAGCGCAAATTTGAACAGATGAAGCAAGATAGGATCACCAGATACCAGGGTG
TAAACCTTTACGTGAAAAATCTCGATGATGGTATTGATGATGAACGTCTCCGGAAAGAGTTTTCTCCGTTCGGTACAATC
ACTAGTGCAAAGGTTATGATGGAGGGTGGTCGCAGCAAAGGGTTTGGATTTGTGTGTTTCTCCTCCCCAGAAGAAGCCAC
TAAAGCAGTTACGGAAATGAATGGTAGAATTGTGGCCACCAAGCCATTGTATGTAGCTTTAGCTCAGCGCAAAGAAGAGC
GCCAGGCTCACCTCACTAACCAGTATATGCAGAGAATGGCAAGTGTAAGAGCTGTGCCCAACCCTGTAATCAACCCCTAC
CAGCCAGCACCTCCTTCAGGTTACTTCATGGCAGCTATCCCACAGACTCAGAACCGTGCTGCATACTATCCTCCTAGCCA
AATTGCTCAACTAAGACCAAGTCCTCGCTGGACTGCTCAGGGTGCCAGACCTCATCCATTCCAAAATATGCCCGGTGCTA
TCCGCCCAGCCGCTCCTAGACCACCATTTAGTACTATGAGACCAGCTTCTTCACAGGTTCCACGAGTCATGTCGACACAG
CGTGTTGCTAACACATCAACACAGACAATGGGTCCACGTCCTGCAGCTGCTGCAGCTGCAGCTACTCCTGCTGTTCGCAC
CGTTCCACAGAATACGCTGCGGGAGTTCGCAATCCCTGCTGTTCATGTACAAGGTCAGGAACCTTTGACTGCTTCCATGT
TGGCATCTGCCCCTCCTCAAGAACAGAAGCAAATGTTGGGTGAACGGCTCTTTCCTCTAATTCAAGCCATGCACCCTACT
CTTGCTGGTAAAATCACTGGCATGTTGTTGGAGATTGATAATTCAGAACTTCTTCATATGCTTGAGTCTCCAGAGTCTCT
CCGTTCTAAAGTTGATGAAGCTGTAGCTGTACTACAAGCCCACCAAGCAAAAGAGGCTGCCCAGAAAGCAGTTAACAGTG
CCACTGGGGTTCCAACTGTTTAA
ATGAACCCCAGCGCCCCCAGCTACCCCATGGCCTCGCTCTACGTGGGGGACCTACACCCCGACGTGACCGAGGCGATGCT
CTATGAGAAGTTCAGTCCGGCCGGGCCCATCCTCTCCATCCGGGTCTGCAGGGACATGATCACCCGCCGCTCCTTGGGCT
ACGCGTATGTGAACTTCCAGCAGCCGGCAGACGCGGAGCGTGCTTTGGACACCATGAATTTTGATGTTATAAAGGGCAAG
CCAGTACGCATTATGTGGTCTCAGCGTGATCCATCACTTCGCAAAAGTGGAGTGGGCAACATATTCATTAAAAATTTGGA
CAAATCCATTGATAATAAAGCACTGTATGATACATTTTCTGCTTTTGGTAACATCCTTTCATGTAAGGTGGTTTGTGATG
AAAATGGTTCCAAGGGTTATGGATTTGTGCATTTTGAGACACAAGAAGCAGCTGAAAGAGCTATTGAAAAAATGAATGGG
ATGCTTCTAAATGATCGCAAAGTATTTGCTGGACGATTTAAGTCTCGTAAGGAACGAGAAGCAGAACTCGGAGCTAGGGC
AAAAGAGTTCACCAATGTTTACATCAAGAATTTTGGAGAAGACATGGATGATGAGCGCCTTAAGGATCTCTTTGGCAAGT
TTGGACCTGCCTTAAGTGTGAAAGTAATGACTGATGAGAGTGGAAAATCCAAAGGTTTTGGATTTGTAAGCTTTGAAAGG
CATGAAGATGCACAGAAAGCTGTGGATGAGATGAACGGAAAGGAGCTCAATGGAAAACAAATTTACGTTGGTCGAGCCCA
GAAAAAAGTGGAAAGACAGACGGAACTTAAGCGCAAATTTGAACAGATGAAGCAAGATAGGATCACCAGATACCAGGGTG
TAAACCTTTACGTGAAAAATCTCGATGATGGTATTGATGATGAACGTCTCCGGAAAGAGTTTTCTCCGTTCGGTACAATC
ACTAGTGCAAAGGTTATGATGGAGGGTGGTCGCAGCAAAGGGTTTGGATTTGTGTGTTTCTCCTCCCCAGAAGAAGCCAC
TAAAGCAGTTACGGAAATGAATGGTAGAATTGTGGCCACCAAGCCATTGTATGTAGCTTTAGCTCAGCGCAAAGAAGAGC
GCCAGGCTCACCTCACTAACCAGTATATGCAGAGAATGGCAAGTGTAAGAGCTGTGCCCAACCCTGTAATCAACCCCTAC
CAGCCAGCACCTCCTTCAGGTTACTTCATGGCAGCTATCCCACAGACTCAGAACCGTGCTGCATACTATCCTCCTAGCCA
AATTGCTCAACTAAGACCAAGTCCTCGCTGGACTGCTCAGGGTGCCAGACCTCATCCATTCCAAAATATGCCCGGTGCTA
TCCGCCCAGCCGCTCCTAGACCACCATTTAGTACTATGAGACCAGCTTCTTCACAGGTTCCACGAGTCATGTCGACACAG
CGTGTTGCTAACACATCAACACAGACAATGGGTCCACGTCCTGCAGCTGCTGCAGCTGCAGCTACTCCTGCTGTTCGCAC
CGTTCCACAGAATACGCTGCGGGAGTTCGCAATCCCTGCTGTTCATGTACAAGGTCAGGAACCTTTGACTGCTTCCATGT
TGGCATCTGCCCCTCCTCAAGAACAGAAGCAAATGTTGGGTGAACGGCTCTTTCCTCTAATTCAAGCCATGCACCCTACT
CTTGCTGGTAAAATCACTGGCATGTTGTTGGAGATTGATAATTCAGAACTTCTTCATATGCTTGAGTCTCCAGAGTCTCT
CCGTTCTAAAGTTGATGAAGCTGTAGCTGTACTACAAGCCCACCAAGCAAAAGAGGCTGCCCAGAAAGCAGTTAACAGTG
CCACTGGGGTTCCAACTGTTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000015833 | ortholog_one2one | 5 retrogenes | |
| Homo sapiens | ENSG00000070756 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017786 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000006222 | ortholog_one2many | 4 retrogenes | |
| Mus musculus | ENSMUSG00000022283 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000003142 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000004354 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000018790 | possible_ortholog | 3 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000016640 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000008639 | ortholog_one2one | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000011267 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000006063 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000002117 | other_paralog | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000014340 | within_species_paralog | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000003865 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ttru_1050 | 64.93 | 58.71 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ttru_1812 | 64.19 | 60.32 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTTRG00000004689 retrocopies