Parental gene: | LIN28A, ENSTTRG00000005678 |
| Aliases: | None |
| Description: | lin-28 homolog A (C. elegans) [Source:HGNC Symbol;Acc:15986] |
| Organism: | Dolphin (Tursiops truncatus) |
| Coordinates: | GeneScaffold_2866:54303..68656(+) |
>ENSTTRG00000005678
GGCGGCGCCAAGGCGCCGGAGGAGGCGCAGGAGGACGCGGCCCGGGCGGCCGAGGAGCCGCAGCTGCTGCACGGAGCCGG
CATCTGTAAGTGGTTCAACGTGCGCATGGGATTCGGCTTCCTGTCCATGACTGCCCGCGCCGGGGTCGCACTCGACCCCC
CGGTGGATGTCTTTGTGCACCAGAGTAAGCTGCACATGGAGGGCTTCCGGAGCCTGAAGGAGGGTGAGGCCGTAGAGTTC
ACCTTTAAGAAGTCTGCCAAGGGCCTGGAATCTATCCGAGTCACCGGCCCTGGTGGGGTGTTCTGTATTGGGAGTGAGAG
GCGGCCCAAAGGGAAGAACATGCAGAAACGCAGATCAAAGGGAGACAGGTGCTACAACTGTGGAGGTCTAGACCATCATG
CCAAGGAATGCAAACTGCCACCCCAGCCCAAGAAGTGCCACTTCTGCCAGAGCATCAACCACATGGTGGCCTCGTGTCCA
CTGAAGGCCCAGCAAGCTCCCAGCTCCCAGGGAAAGCCAGCCTGCTTTCGGGAGGAGGAAGAAGAGATCCATAGCCCTGC
CATGCTCCCCGAGGCCCAGAATTGA
GGCGGCGCCAAGGCGCCGGAGGAGGCGCAGGAGGACGCGGCCCGGGCGGCCGAGGAGCCGCAGCTGCTGCACGGAGCCGG
CATCTGTAAGTGGTTCAACGTGCGCATGGGATTCGGCTTCCTGTCCATGACTGCCCGCGCCGGGGTCGCACTCGACCCCC
CGGTGGATGTCTTTGTGCACCAGAGTAAGCTGCACATGGAGGGCTTCCGGAGCCTGAAGGAGGGTGAGGCCGTAGAGTTC
ACCTTTAAGAAGTCTGCCAAGGGCCTGGAATCTATCCGAGTCACCGGCCCTGGTGGGGTGTTCTGTATTGGGAGTGAGAG
GCGGCCCAAAGGGAAGAACATGCAGAAACGCAGATCAAAGGGAGACAGGTGCTACAACTGTGGAGGTCTAGACCATCATG
CCAAGGAATGCAAACTGCCACCCCAGCCCAAGAAGTGCCACTTCTGCCAGAGCATCAACCACATGGTGGCCTCGTGTCCA
CTGAAGGCCCAGCAAGCTCCCAGCTCCCAGGGAAAGCCAGCCTGCTTTCGGGAGGAGGAAGAAGAGATCCATAGCCCTGC
CATGCTCCCCGAGGCCCAGAATTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000010582 | possible_ortholog | 2 retrogenes | |
| Bos taurus | ENSBTAG00000040497 | ortholog_one2many | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000009796 | ortholog_one2many | 5 retrogenes | |
| Cavia porcellus | ENSCPOG00000019646 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000010710 | ortholog_one2one | 5 retrogenes | |
| Homo sapiens | ENSG00000131914 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000024918 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000010158 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000009294 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000000299 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003971 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000001684 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000000384 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000038409 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000004329 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ttru_481 | 92.11 | 97.42 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ttru_548 | 89.95 | 97.42 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ttru_1312 | 88.74 | 76.29 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ttru_1559 | 84.77 | 77.32 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTTRG00000005678 retrocopies