Parental gene: | C20OX2, OBART01G39570 |
| Aliases: | None |
| Description: | GA C20oxidase2; SD1 [Source:UniProtKB/TrEMBL;Acc:B6F2E4] |
| Organism: | Oryza barthii |
| Coordinates: | 1:32476847..32480004(+) |
>OBART01G39570
ATGGTGGCCGAGCACCCCACGCCACCACAGCCGCACCAACCACCGCCCATGGACTCCACCGCCGGCTCTGGCATTGCCGC
CCCGGCGGCGGCGGCGGTGTGCGACCTGAGGATGGAGCCCAAGATCCCGGAGCCATTCGTGTGGCCGAACGGCGACGCGA
GGCCGGCGTCGGCGGCGGAGCTGGACATGCCCGTGGTCGACGTGGGCGTGCTCCGCGACGGCGACGCCGAGGGGCTGCGC
CGCGCCGCGGCGCAGGTGGCCGCCGCGTGCGCCACGCACGGGTTCTTCCAGGTGTCCGGGCACGGCGTCGACGCCGCCCT
GGCGCGCGCCGCGCTCGACGGCGCCAGCGACTTCTTCCGCCTCCCGCTCGCCGAGAAGCGCCGCGCCCGCCGCGTCCCGG
GCACCGTGTCCGGCTACACCAGCGCCCACGCCGACCGCTTCGCCTCCAAGCTCCCGTGGAAGGAGACCCTCTCCTTCGGC
TTCCACGACCGCGCCGCCGCCCCCGTCGTCGCCGACTACTTCTCCAGCACCCTCGGCCCCGACTTCGCGCCAATGGGGAG
GGTGTACCAGAAGTACTGCGAGGAGATGAAGGAGCTGTCGCTGACGATCATGGAGCTCCTGGAGCTGAGCCTGGGCGTGG
AGCGAGGCTACTACAGGGAGTTCTTCGCGGACAGCAGCTCAATCATGCGGTGCAACTACTACCCGCCATGCCCGGAGCCG
GAGCGGACGCTCGGCACGGGCCCGCACTGCGACCCCACCGCCCTCACCATCCTCCTCCAGGACGACGTCGGCGGCCTCGA
GGTCCTCGTCGACGGCGAATGGCGCCCCGTCAGCCCCGTCCCCGGCGCCATGGTCATCAACATCGGCGACACCTTCATGG
CGCTGTCGAACGGGAGGTATAAGAGCTGCCTGCACAGGGCGGTGGTGAACCAGCGGCGGGAGCGGCGGTCGCTGGCGTTC
TTCCTGTGCCCGCGGGAGGACAGGGTGGTGCGGCCGCCGCCGAGCGCCGCCACGCCGCGGCACTACCCGGACTTCACCTG
GGCCGACCTCATGCGCTTCACGCAGCGCCACTACCGCGCCGACACCCGCACGCTCGACGCCTTCACGCGCTGGCTCGCGC
CGCCGGCCGCCGACGCCGCCGCGACGGCGCAGGTCGAGGCGGCCAGCTGA
ATGGTGGCCGAGCACCCCACGCCACCACAGCCGCACCAACCACCGCCCATGGACTCCACCGCCGGCTCTGGCATTGCCGC
CCCGGCGGCGGCGGCGGTGTGCGACCTGAGGATGGAGCCCAAGATCCCGGAGCCATTCGTGTGGCCGAACGGCGACGCGA
GGCCGGCGTCGGCGGCGGAGCTGGACATGCCCGTGGTCGACGTGGGCGTGCTCCGCGACGGCGACGCCGAGGGGCTGCGC
CGCGCCGCGGCGCAGGTGGCCGCCGCGTGCGCCACGCACGGGTTCTTCCAGGTGTCCGGGCACGGCGTCGACGCCGCCCT
GGCGCGCGCCGCGCTCGACGGCGCCAGCGACTTCTTCCGCCTCCCGCTCGCCGAGAAGCGCCGCGCCCGCCGCGTCCCGG
GCACCGTGTCCGGCTACACCAGCGCCCACGCCGACCGCTTCGCCTCCAAGCTCCCGTGGAAGGAGACCCTCTCCTTCGGC
TTCCACGACCGCGCCGCCGCCCCCGTCGTCGCCGACTACTTCTCCAGCACCCTCGGCCCCGACTTCGCGCCAATGGGGAG
GGTGTACCAGAAGTACTGCGAGGAGATGAAGGAGCTGTCGCTGACGATCATGGAGCTCCTGGAGCTGAGCCTGGGCGTGG
AGCGAGGCTACTACAGGGAGTTCTTCGCGGACAGCAGCTCAATCATGCGGTGCAACTACTACCCGCCATGCCCGGAGCCG
GAGCGGACGCTCGGCACGGGCCCGCACTGCGACCCCACCGCCCTCACCATCCTCCTCCAGGACGACGTCGGCGGCCTCGA
GGTCCTCGTCGACGGCGAATGGCGCCCCGTCAGCCCCGTCCCCGGCGCCATGGTCATCAACATCGGCGACACCTTCATGG
CGCTGTCGAACGGGAGGTATAAGAGCTGCCTGCACAGGGCGGTGGTGAACCAGCGGCGGGAGCGGCGGTCGCTGGCGTTC
TTCCTGTGCCCGCGGGAGGACAGGGTGGTGCGGCCGCCGCCGAGCGCCGCCACGCCGCGGCACTACCCGGACTTCACCTG
GGCCGACCTCATGCGCTTCACGCAGCGCCACTACCGCGCCGACACCCGCACGCTCGACGCCTTCACGCGCTGGCTCGCGC
CGCCGGCCGCCGACGCCGCCGCGACGGCGCAGGTCGAGGCGGCCAGCTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Leersia perrieri | LPERR01G34060 | ortholog_one2one | 1 retrogene | |
| Oryza meridionalis | OMERI01G36440 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA01G0334700 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS01G0883800 | ortholog_one2one | 1 retrogene | |
| Setaria italica | Si001573m.g | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_obar_12 | 53.20 | 85.86 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OBART01G39570 retrocopies