Parental gene: | OS04G0492100 |
| Aliases: | None |
| Description: | Os04g0492100 protein [Source:UniProtKB/TrEMBL;Acc:Q0JC49] |
| Organism: | Rice subsp. japonica (Oryza sativa japonica) |
| Coordinates: | 4:24584942..24588712(+) |
>OS04G0492100
GGTTTTCCGGAAAAGCTCATCGAAATGCCAAATGACAGAGAATTGACATGTGGAATTTGTTTCGAAAATTGTCCTCGTAC
GTCAATGAGTGCTGCTGCATGTGGCCATCCGTTCTGTAGTGCATGTTGGAGAGGTTATATTAGCACTTCTATAAATGATG
GTCCAGGATGCTTGATGTTAAGATGTCCTGATCCGTCCTGCACAGCTGCTGTTGGTCAAGATATGATCAATTCACTGGCT
GATGACGAGGATAGGGAAAAGTATGGGCGATATCTTCGCAGATCTTACATTGAAGATAATAGGAAGACAAAATGGTGTCC
TGCTCCTGGATGTGAATATGCTGTAGAATTTGTCATGGGCAGTGGTAGCTATGATGTGAACTGCAACTGTTCATACGGCT
TTTGTTGGAACTGCACTGAGGAAGCTCATCGTCCGGTAGACTGTGCCACTGTTTCAAAGTGGATCCTCAAGAACAGTGCG
GAGTCTGAAAATATGAACTGGATTCTAGCTAATTCAAAGCCTTGTCCTAAGTGCAAGCGGCCCATTGAAAAAAACCAGGG
ATGCATGCACATTACATGCACACCTCCATGCAAATTTGAGTTTTGCTGGCTGTGTCTTGGTCCATGGTCGGAGCATGGAG
AACGGACTGGTGGATTTTATGCCTGTAACCGTTATGAGGCAGCAAGGCAGGAAGGAGCGTATGATGAATCTGAAAGGAGA
AGAGAAATGGCAAAGAACTCGCTTGAGAGATATACACACTATTATGAACGGTGGGCAGCCAATCAGTCGTCGAGGCAAAA
GGCATTAGGAGATCTGCTGAGTTTGCAAAACGACAAGCTTGAAAAGTTAAGTGATATACAAAGCCAACCAGAGTCACAGC
TCAAGTTCATCATAGAGGCTTGGTTACAGATTGTCGAATGTAGGAGGGTATTGAAGTGGACTTATGCTTATGGTTTTTAC
CTCCCAGAGCATGAACATGCCAAAAGACAGTTCTTTGAATATCTGCAAGGTGAGGCGGAATCAGGTTTGGAGCGGCTGCA
TCAATGTGCAGAGAAAGAACTTCAAGTATACCTTGAAGCAGAATCTCCCTCAAAAGATTTCAATGACTTCCGTACAAAGT
TGGCTGGATTAACTAGTGTGACTCGCAATTATTTCGAGAACCTTGTCCGGGCTTTGGAGACTGGATTAAATGATGTAGGT
CCTTCCACTAGCCATGGTACATGCAGCAAGAGCGCAACTTCGAAGAGTCTTGGCAGTAAAAGTAAGAGTAGCAAGAGCAG
AGCATCCAGTACCAGCTCCAAAACAGGTGGCTCGAGCCGTGGTGTCGATGAAAGCAACATTTGGACGTGTGACCAGTGCA
CATATGCTAACCCCAGATCTGCCAGAAACTGCCAGGCTTGTAACAACCAGCATCGATAG
GGTTTTCCGGAAAAGCTCATCGAAATGCCAAATGACAGAGAATTGACATGTGGAATTTGTTTCGAAAATTGTCCTCGTAC
GTCAATGAGTGCTGCTGCATGTGGCCATCCGTTCTGTAGTGCATGTTGGAGAGGTTATATTAGCACTTCTATAAATGATG
GTCCAGGATGCTTGATGTTAAGATGTCCTGATCCGTCCTGCACAGCTGCTGTTGGTCAAGATATGATCAATTCACTGGCT
GATGACGAGGATAGGGAAAAGTATGGGCGATATCTTCGCAGATCTTACATTGAAGATAATAGGAAGACAAAATGGTGTCC
TGCTCCTGGATGTGAATATGCTGTAGAATTTGTCATGGGCAGTGGTAGCTATGATGTGAACTGCAACTGTTCATACGGCT
TTTGTTGGAACTGCACTGAGGAAGCTCATCGTCCGGTAGACTGTGCCACTGTTTCAAAGTGGATCCTCAAGAACAGTGCG
GAGTCTGAAAATATGAACTGGATTCTAGCTAATTCAAAGCCTTGTCCTAAGTGCAAGCGGCCCATTGAAAAAAACCAGGG
ATGCATGCACATTACATGCACACCTCCATGCAAATTTGAGTTTTGCTGGCTGTGTCTTGGTCCATGGTCGGAGCATGGAG
AACGGACTGGTGGATTTTATGCCTGTAACCGTTATGAGGCAGCAAGGCAGGAAGGAGCGTATGATGAATCTGAAAGGAGA
AGAGAAATGGCAAAGAACTCGCTTGAGAGATATACACACTATTATGAACGGTGGGCAGCCAATCAGTCGTCGAGGCAAAA
GGCATTAGGAGATCTGCTGAGTTTGCAAAACGACAAGCTTGAAAAGTTAAGTGATATACAAAGCCAACCAGAGTCACAGC
TCAAGTTCATCATAGAGGCTTGGTTACAGATTGTCGAATGTAGGAGGGTATTGAAGTGGACTTATGCTTATGGTTTTTAC
CTCCCAGAGCATGAACATGCCAAAAGACAGTTCTTTGAATATCTGCAAGGTGAGGCGGAATCAGGTTTGGAGCGGCTGCA
TCAATGTGCAGAGAAAGAACTTCAAGTATACCTTGAAGCAGAATCTCCCTCAAAAGATTTCAATGACTTCCGTACAAAGT
TGGCTGGATTAACTAGTGTGACTCGCAATTATTTCGAGAACCTTGTCCGGGCTTTGGAGACTGGATTAAATGATGTAGGT
CCTTCCACTAGCCATGGTACATGCAGCAAGAGCGCAACTTCGAAGAGTCTTGGCAGTAAAAGTAAGAGTAGCAAGAGCAG
AGCATCCAGTACCAGCTCCAAAACAGGTGGCTCGAGCCGTGGTGTCGATGAAAGCAACATTTGGACGTGTGACCAGTGCA
CATATGCTAACCCCAGATCTGCCAGAAACTGCCAGGCTTGTAACAACCAGCATCGATAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Arabidopsis thaliana | AT1G05890 | ortholog_one2many | 1 retrogene | |
| Brassica oleracea | Bo5g007100 | ortholog_one2many | 1 retrogene | |
| Brassica oleracea | Bo8g005850 | ortholog_one2many | 1 retrogene | |
| Brassica rapa | Bra015463 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_osat_31 | 50.12 | 83.26 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OS04G0492100 retrocopies