RetrogeneDB ID: | retro_chof_1501 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_309734:388..721(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FUNDC2 | ||
Ensembl ID: | ENSCHOG00000004306 | ||
Aliases: | None | ||
Description: | FUN14 domain containing 2 [Source:HGNC Symbol;Acc:24925] |
Percent Identity: | 76.11 % |
Parental protein coverage: | 77.08 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | EKYSVATQLLIGGVTG-WCTGFIFQKVGKLAATAVGGGFFLLQLANHTGYIKVDWQRVEKDMKKAKEQL- |
.KYS.ATQLLI.GVT..WCTGFIFQKVGKLAATAVGGGFFLLQLANH.GYIKVDWQ.VE.DMKKAK.QL. | |
Retrocopy | KKYSRATQLLIEGVTN<WCTGFIFQKVGKLAATAVGGGFFLLQLANHAGYIKVDWQ*VEEDMKKAKKQL> |
Parental | KIHKSNQIPTEVRSKAEEXXXXXXXXXLMTGGFFGGFLVGMAS |
K..KSNQIPTEV.SKAE...........MTGGF.GGFL..MAS | |
Retrocopy | KNPKSNQIPTEVKSKAEKFISFAKKNIPMTGGFLGGFLFTMAS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |