RetrogeneDB ID: | retro_etel_103 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_1947:60982..61319(+) | ||
Located in intron of: | ENSETEG00000006311 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSETEG00000005968 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 64.35 % |
Parental protein coverage: | 71.34 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | STPSLVRST-SQLLSRPLSVLVQKRPETLSDERFSSLT-APRSQTSLVPSRSFQTSTVSRDIDTAAKFIG |
ST.SLV.S...Q.....LSVL.QK...TL.DER.SS.T..P.S.TSL....SF.T.T.SRD.DTAAKF.. | |
Retrocopy | STSSLVKSR>AQAAEQILSVLLQKQSKTLTDERVSSWT>SPSSLTSLIRRCSFSTPTISRDTDTAAKFTE |
Parental | AGAATVG-VAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGF |
A...TVG.VAGSGAGI..VF.SL..G.ARNPSLKQQLFSYAILGF | |
Retrocopy | ARTVTVG<VAGSGAGIRAVFRSLTNGDARNPSLKQQLFSYAILGF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |