RetrogeneDB ID: | retro_etel_1030 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_201949:133..443(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37 | ||
Ensembl ID: | ENSETEG00000003463 | ||
Aliases: | None | ||
Description: | ribosomal protein L37 [Source:HGNC Symbol;Acc:10347] |
Percent Identity: | 68.52 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | LWSRPQKRDDEGNVILRKANK--THTLCRRCGSKAYHLQKSTC-GKCGYPAKRKRKYNWSAKAKRRNTTG |
LWS.PQK.DDEGN.IL.KA.....H....R.GSKAYHLQKS...G.CG.PAK.KRKYN.......RNTTG | |
Retrocopy | LWSGPQKPDDEGNAILGKASQ*DAHLVPPR-GSKAYHLQKSPV<GTCGCPAKHKRKYN-ECRG*KRNTTG |
Parental | TGRMRH-LKIVYRRFRHGFREGTTPKPKRAAVAASSSS |
TG.MRH.L..V.RRFRHGFREGTTP.P.RAAVAASSSS | |
Retrocopy | TGQMRH<LNVVCRRFRHGFREGTTPTPERAAVAASSSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |