RetrogeneDB ID: | retro_etel_1044 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_20361:1485..1881(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000003928 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL5 | ||
Ensembl ID: | ENSETEG00000009889 | ||
Aliases: | None | ||
Description: | ribosomal protein L5 [Source:HGNC Symbol;Acc:10360] |
Percent Identity: | 87.22 % |
Parental protein coverage: | 50.76 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | VESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHILG |
.ESIDGQPGAFTCYLDAGLARTTTGN.VFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNA.VHRKHILG | |
Retrocopy | MESIDGQPGAFTCYLDAGLARTTTGNSVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAGVHRKHILG |
Parental | QNVAEYMRYLMEEDEDAYKKQFSQYIKNNVTPDMMEEMYKKAHATIRENPVYEKKPKRDVKKK |
QN.A.Y..Y.MEEDE.A.KKQFSQYIK.NVTPDMM.E.YKKAHATI.ENPVYE.KPK..VKKK | |
Retrocopy | QNLADYIHYQMEEDEGAHKKQFSQYIKKNVTPDMMGEKYKKAHATIQENPVYE-KPKKEVKKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |