RetrogeneDB ID: | retro_etel_1045 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_203714:6682..6937(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | IFT20 | ||
Ensembl ID: | ENSETEG00000018843 | ||
Aliases: | None | ||
Description: | intraflagellar transport 20 homolog (Chlamydomonas) [Source:HGNC Symbol;Acc:30989] |
Percent Identity: | 66.29 % |
Parental protein coverage: | 55.48 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | FQKIVGGLIGL-VDQLAKE-AENEKMKAIGARNLLKSIAKQREAQQQQLQALIAEKKMQLERYRVEYEAL |
FQKI.GGL.GL.VD..AK..AENEKMK.I.A.NLLKSIA......QQQL.ALIA.KK.QLE.Y..EYEAL | |
Retrocopy | FQKIIGGLTGL<VD*PAKQ<AENEKMKVISAQNLLKSIAEHSQVHQQQL*ALIAQKKIQLEKYLIEYEAL |
Parental | CKVEAEQNE-FIDQFIFQK |
CK.E......FIDQFIF.K | |
Retrocopy | CKGEXXXXN<FIDQFIFPK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |