RetrogeneDB ID: | retro_etel_1050 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_204217:556..885(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000011332 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000015189 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 73.87 % |
Parental protein coverage: | 99.1 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | QRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVS |
.R.EDV.LI.EQHPT.IP..I.RYKGEKQLPVLDKT.FLVPDH.N.S..IKII.R.LQ.NANQAFFL.VS | |
Retrocopy | ERMEDVQLIQEQHPTQIPGTIKRYKGEKQLPVLDKTTFLVPDHINRSVHIKII*RHLQVNANQAFFLPVS |
Parental | GHSMVSVSTPISEV-YESERDEDGFLYMVYASQETFGMKPA |
.HSMVSVSTPI..V..ES..D.DGFLYMV..SQE..GMKPA | |
Retrocopy | SHSMVSVSTPIAKV<VESQQDADGFLYMVFTSQERLGMKPA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |