RetrogeneDB ID: | retro_etel_106 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_2009:107183..107447(+) | ||
Located in intron of: | ENSETEG00000019956 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSETEG00000003715 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 93.18 % |
Parental protein coverage: | 97.75 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | QRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSAC-GVCPGRLRGVRAVRPKVLMRLSKTK |
QRLTYR.RLSYNTASNKTRLSRTPGNR.VY.YTKKVGK.PKSAC.GVCPGRLRGVRAVRPKVLMRLSKTK | |
Retrocopy | QRLTYRHRLSYNTASNKTRLSRTPGNRTVYFYTKKVGKVPKSACHGVCPGRLRGVRAVRPKVLMRLSKTK |
Parental | KHVSRAYGGSMCAKCVRD |
KHVS.AYGGSMCAKCVRD | |
Retrocopy | KHVSSAYGGSMCAKCVRD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |