RetrogeneDB ID: | retro_etel_1090 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_210144:2786..3059(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSETEG00000014352 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 68.13 % |
Parental protein coverage: | 98.91 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | AKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWTY |
AK.T.KV.IV.KY.TRYGASL.KMVKKI.IS.HAKYTCSFCGKTK.K.RAVGIWHC.SC.....G...T. | |
Retrocopy | AKHTQKVDIVAKYETRYGASLGKMVKKINISPHAKYTCSFCGKTKLKSRAVGIWHCRSCRTAAGGAGLTP |
Parental | NTTSAVTVKSAIRRLKELKDQ |
...SA.T...A.RRLKE.KDQ | |
Retrocopy | PPLSALTGQPASRRLKEFKDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |