RetrogeneDB ID: | retro_etel_1094 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_210399:18..233(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SRP14 | ||
Ensembl ID: | ENSETEG00000011870 | ||
Aliases: | None | ||
Description: | signal recognition particle 14kDa (homologous Alu RNA binding protein) [Source:HGNC Symbol;Acc:11299] |
Percent Identity: | 60.81 % |
Parental protein coverage: | 63.48 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | TKPIPRKGSVDTFEPSDNKCLLRAT-DGKKKISTVXXXXXXXXXXXAYSSLLRANMDGLKKRDKKSRSKK |
TKPIP..GSV.TF.PSDNKC.LRA..D.K..I.TV...........AYS.LL.A..DGLKKR.KKS.SKK | |
Retrocopy | TKPIPAQGSVNTFKPSDNKCQLRAM<DEK-NIPTVVSSKVANKCQMAYSNLL*ACTDGLKKRGKKSQSKK |
Parental | SKAA |
S.AA | |
Retrocopy | STAA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |