RetrogeneDB ID: | retro_etel_118 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_2217:101466..101733(+) | ||
Located in intron of: | ENSETEG00000007550 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37 | ||
Ensembl ID: | ENSETEG00000003463 | ||
Aliases: | None | ||
Description: | ribosomal protein L37 [Source:HGNC Symbol;Acc:10347] |
Percent Identity: | 60.67 % |
Parental protein coverage: | 84.62 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | ILRKANKTHTLCRRCG-SKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVYRRFRH |
ILRK..........CG.S.A..LQKST.G....PA.RKRK.NW.A.AKR..TTGTGRM.H..IV..R.RH | |
Retrocopy | ILRKGSQEDAHLGPCGGSTAHQLQKSTWG*RASPATRKRKDNWRAHAKR*TTTGTGRMSHWDIVSCRCRH |
Parental | GFREGTTPKPKRAAVAASS |
.F.EGTTP.PKRAAVA.SS | |
Retrocopy | RFWEGTTPTPKRAAVATSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |