RetrogeneDB ID: | retro_etel_1195 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_226352:3589..3846(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37 | ||
Ensembl ID: | ENSETEG00000003463 | ||
Aliases: | None | ||
Description: | ribosomal protein L37 [Source:HGNC Symbol;Acc:10347] |
Percent Identity: | 86.21 % |
Parental protein coverage: | 81.73 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | RKANKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFR |
...NKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYN.SAKAKR.NTTGTGRMRHLKIV.RRFR.GFR | |
Retrocopy | KRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNRSAKAKR*NTTGTGRMRHLKIVDRRFRRGFR |
Parental | EG-TT-PKPKRAAVAAS |
EG.TT.P.P.RAAVA.S | |
Retrocopy | EG>TT>PTPERAAVAGS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |