RetrogeneDB ID: | retro_etel_12 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_292337:1265..1790(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000001978 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000008408 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 81.92 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAKDCDLQ |
MS..ECF.C.RSGHWA.ECPTGGG.G.GMRSR.RG.....RGF.FVSSSLPDIC.R..ESGHLAKDCDLQ | |
Retrocopy | MSNTECFQCERSGHWAQECPTGGGHGHGMRSRSRG--SRSRGFRFVSSSLPDICCR-DESGHLAKDCDLQ |
Parental | EDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRC |
E.AC.NCGRGGH.AKDCKEPKR.REQCCYNC.KPGHLA..CDHA.E.KCYSCGEF.HIQKDCTKVKCYRC | |
Retrocopy | ENACSNCGRGGHLAKDCKEPKRDREQCCYNCEKPGHLAPGCDHAGELKCYSCGEFEHIQKDCTKVKCYRC |
Parental | GETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA |
.ET.HVAINCSK.SEVNCYRCGESG.LARECT.EATA | |
Retrocopy | AETSHVAINCSKASEVNCYRCGESGRLARECTSEATA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |