RetrogeneDB ID: | retro_etel_1232 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_232470:6258..6468(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSETEG00000003715 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 71.43 % |
Parental protein coverage: | 78.65 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKT |
MVQ.L.YR.RLS.NTASNKT.LS.TPGNR.VYLYTK.VGKAP.SACG.CPG...G....R.KV.M.LSKT | |
Retrocopy | MVQLLIYRHRLS*NTASNKTSLS*TPGNRVVYLYTKQVGKAPRSACGICPG*FQGAQTERMKVRMMLSKT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |