RetrogeneDB ID: | retro_etel_1270 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_238666:6318..6770(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS14 | ||
Ensembl ID: | ENSETEG00000002899 | ||
Aliases: | None | ||
Description: | ribosomal protein S14 [Source:HGNC Symbol;Acc:10387] |
Percent Identity: | 88.16 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESS |
MAP.KGK.KKEEQVISLG.QVAEGENVFGVCH.FASFN..FV.V.DLSGKETICRV.GGMKVKAD.DESS | |
Retrocopy | MAPHKGKGKKEEQVISLGLQVAEGENVFGVCHLFASFNGPFVRVPDLSGKETICRVKGGMKVKAD*DESS |
Parental | PYAAMLAAQDVAQRCKELGIT-ALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDS |
..AAMLAAQDVAQRCKELGIT.ALHIKLRATGGNRTKTPGPG.QSAL.ALARSGMKIGRIEDVTP.PSDS | |
Retrocopy | LNAAMLAAQDVAQRCKELGIT<ALHIKLRATGGNRTKTPGPGTQSALPALARSGMKIGRIEDVTPVPSDS |
Parental | TRRKGGRRGRRL |
T.RKGGRRGR.L | |
Retrocopy | TLRKGGRRGRWL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |